Detail information of GWHGAAEX009157/evm.TU.scaffold_238.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743786855|ref|XP_010922276.1|4.09E-149PREDICTED: uncharacterized protein LOC105045623 isoform X1 [Elaeis guineensis]
trEMBLtr|M0RE72|M0RE72_MUSAM9.00E-149Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P00450_001}
TAIRAT5G021302.00E-107Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000243412549416219-
Transcript Sequence

Network for GWHGAAEX009157

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.690
SRR2545915Juvenile tuber15.090
SRP108465SRR5643513five period of Gastrodia elata14.040
SRR5643514five period of Gastrodia elata15.880
SRR5643515five period of Gastrodia elata15.470
SRR5643524five period of Gastrodia elata16.180
SRR5643525five period of Gastrodia elata10.570
SRR5643528five period of Gastrodia elata8.280
SRR5643658five period of Gastrodia elata13.190
SRR5643659five period of Gastrodia elata10.340
SRR5643660five period of Gastrodia elata9.240
SRR5643661five period of Gastrodia elata10.650
SRR5643662five period of Gastrodia elata10.740
SRR5643663five period of Gastrodia elata12.300
SRR5643664five period of Gastrodia elata11.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.430
SRR6049655Rhizomagastrodiae_C368-T10_good_110.760
SRR6049656Rhizomagastrodiae_C368-T07_good_113.030
SRR6049657Rhizomagastrodiae_C368-T07_good_114.290
SRR6049658Rhizomagastrodiae_C368-T04_good_112.640
SRR6049659Rhizomagastrodiae_C368-T04_good_112.070
SRR6049660Rhizomagastrodiae_C368-T01_good_114.060
SRR6049661Rhizomagastrodiae_C368-T04_good_111.460
SRR6049662Rhizomagastrodiae_C368-T01_good_111.960
SRR6049663Rhizomagastrodiae_C368-T01_good_112.150
SRR6049664Rhizomagastrodiae_C368-T10_good_114.880
SRR6049665Rhizomagastrodiae_C368-T10_good_114.880
SRP279888GastroGastrodia elata tuber 12.87
JuvenJuvenile tuber13.95
Mother_GastroMother tuber of Gastrodia elata 8.98
Mother_JuvenMother tuber of Juvenile 8.07