Detail information of GWHGAAEX009166/evm.TU.scaffold_238.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|302384400|ref|YP_003820223.1|3.00E-30pyrimidine 5'-nucleotidase [Brevundimonas subvibrioides ATCC 15264]
KOGKOG31091.00E-114Haloacid dehalogenase-like hydrolase
nrgi|720003134|ref|XP_010256890.1|7.25E-135PREDICTED: uncharacterized protein LOC104597165 [Nelumbo nucifera]
trEMBLtr|B6TKR3|B6TKR3_MAIZE2.00E-131Catalytic/ hydrolase {ECO:0000313|EMBL:ACG37696.1}
TAIRAT5G594801.00E-114Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000243576753579103+
Transcript Sequence

Network for GWHGAAEX009166

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.520
SRR2545915Juvenile tuber19.750
SRP108465SRR5643513five period of Gastrodia elata24.820
SRR5643514five period of Gastrodia elata48.780
SRR5643515five period of Gastrodia elata37.860
SRR5643524five period of Gastrodia elata43.030
SRR5643525five period of Gastrodia elata107.050
SRR5643528five period of Gastrodia elata78.590
SRR5643658five period of Gastrodia elata79.640
SRR5643659five period of Gastrodia elata11.000
SRR5643660five period of Gastrodia elata12.300
SRR5643661five period of Gastrodia elata14.790
SRR5643662five period of Gastrodia elata19.350
SRR5643663five period of Gastrodia elata12.590
SRR5643664five period of Gastrodia elata33.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.710
SRR6049655Rhizomagastrodiae_C368-T10_good_173.320
SRR6049656Rhizomagastrodiae_C368-T07_good_150.430
SRR6049657Rhizomagastrodiae_C368-T07_good_134.700
SRR6049658Rhizomagastrodiae_C368-T04_good_139.310
SRR6049659Rhizomagastrodiae_C368-T04_good_137.690
SRR6049660Rhizomagastrodiae_C368-T01_good_146.020
SRR6049661Rhizomagastrodiae_C368-T04_good_146.620
SRR6049662Rhizomagastrodiae_C368-T01_good_149.460
SRR6049663Rhizomagastrodiae_C368-T01_good_162.210
SRR6049664Rhizomagastrodiae_C368-T10_good_159.080
SRR6049665Rhizomagastrodiae_C368-T10_good_159.080
SRP279888GastroGastrodia elata tuber 76.52
JuvenJuvenile tuber37.72
Mother_GastroMother tuber of Gastrodia elata 310.55
Mother_JuvenMother tuber of Juvenile 66.84