Detail information of GWHGAAEX009167/evm.TU.scaffold_238.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672122533|ref|XP_008784600.1|5.36E-126PREDICTED: telomere repeat-binding protein 5 [Phoenix dactylifera]
Swissprottr|Q9SNB9|TRP2_ARATH5.00E-94Telomere repeat-binding protein 2
trEMBLtr|M0RKI7|M0RKI7_MUSAM5.00E-125Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P22620_001}
TAIRAT3G465902.00E-93TRF-like 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000243583753586751+
Transcript Sequence

Network for GWHGAAEX009167

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.580
SRR2545915Juvenile tuber12.020
SRP108465SRR5643513five period of Gastrodia elata11.190
SRR5643514five period of Gastrodia elata13.180
SRR5643515five period of Gastrodia elata9.160
SRR5643524five period of Gastrodia elata8.760
SRR5643525five period of Gastrodia elata4.690
SRR5643528five period of Gastrodia elata5.350
SRR5643658five period of Gastrodia elata5.540
SRR5643659five period of Gastrodia elata6.090
SRR5643660five period of Gastrodia elata5.590
SRR5643661five period of Gastrodia elata6.440
SRR5643662five period of Gastrodia elata5.150
SRR5643663five period of Gastrodia elata5.770
SRR5643664five period of Gastrodia elata4.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.790
SRR6049655Rhizomagastrodiae_C368-T10_good_118.950
SRR6049656Rhizomagastrodiae_C368-T07_good_120.190
SRR6049657Rhizomagastrodiae_C368-T07_good_112.480
SRR6049658Rhizomagastrodiae_C368-T04_good_114.260
SRR6049659Rhizomagastrodiae_C368-T04_good_111.890
SRR6049660Rhizomagastrodiae_C368-T01_good_118.210
SRR6049661Rhizomagastrodiae_C368-T04_good_113.960
SRR6049662Rhizomagastrodiae_C368-T01_good_123.430
SRR6049663Rhizomagastrodiae_C368-T01_good_130.200
SRR6049664Rhizomagastrodiae_C368-T10_good_123.530
SRR6049665Rhizomagastrodiae_C368-T10_good_123.530
SRP279888GastroGastrodia elata tuber 4.14
JuvenJuvenile tuber5.47
Mother_GastroMother tuber of Gastrodia elata 6.06
Mother_JuvenMother tuber of Juvenile 3.80