Detail information of GWHGAAEX009171/evm.TU.scaffold_238.27
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2642 | 2.00E-125 | Alpha-1,2 glucosyltransferase/transcriptional activator |
| nr | gi|672135218|ref|XP_008791275.1| | 0 | PREDICTED: putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X3 [Phoenix dactylifera] |
| trEMBL | tr|M0THQ1|M0THQ1_MUSAM | 9.00E-174 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P15140_001} |
| TAIR | AT5G02410 | 2.00E-125 | DIE2/ALG10 family |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000243 | 657849 | 706387 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009171
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04922.11 | DIE2_ALG10 | 25 | 424 | 8.70E-110 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT59 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K03850 | ALG10 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006488 | Biological Process | dolichol-linked oligosaccharide biosynthetic process |
| GO:0004583 | Molecular Function | dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity |
| GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.570 |
| SRR2545915 | Juvenile tuber | 14.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.630 |
| SRR5643514 | five period of Gastrodia elata | 3.740 | |
| SRR5643515 | five period of Gastrodia elata | 5.500 | |
| SRR5643524 | five period of Gastrodia elata | 5.030 | |
| SRR5643525 | five period of Gastrodia elata | 6.940 | |
| SRR5643528 | five period of Gastrodia elata | 4.750 | |
| SRR5643658 | five period of Gastrodia elata | 7.110 | |
| SRR5643659 | five period of Gastrodia elata | 4.670 | |
| SRR5643660 | five period of Gastrodia elata | 5.410 | |
| SRR5643661 | five period of Gastrodia elata | 4.860 | |
| SRR5643662 | five period of Gastrodia elata | 5.360 | |
| SRR5643663 | five period of Gastrodia elata | 5.970 | |
| SRR5643664 | five period of Gastrodia elata | 3.500 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.670 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.910 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.360 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.570 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.760 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.800 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.680 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.830 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.350 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.240 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.870 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.870 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.68 |
| Juven | Juvenile tuber | 10.96 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.22 | |
| Mother_Juven | Mother tuber of Juvenile | 6.16 |