Detail information of GWHGAAEX009172/evm.TU.scaffold_238.28
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 1.00E-26 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| nr | gi|695034202|ref|XP_009404603.1| | 0 | PREDICTED: putative wall-associated receptor kinase-like 16 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9LMP1|WAK2_ARATH | 6.00E-178 | Wall-associated receptor kinase 2 (Precursor) |
| trEMBL | tr|F6GSN9|F6GSN9_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB43294.1} |
| TAIR | AT1G21270 | 2.00E-177 | wall-associated kinase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000243 | 706502 | 723549 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009172
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13947.5 | GUB_WAK_bind | 21 | 122 | 4.60E-24 |
| PF08488.10 | WAK | 165 | 277 | 4.20E-06 |
| PF07645.14 | EGF_CA | 292 | 328 | 8.00E-09 |
| PF00069.24 | Pkinase | 429 | 694 | 3.50E-49 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_WAK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005509 | Molecular Function | calcium ion binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0030247 | Molecular Function | polysaccharide binding |
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.760 |
| SRR2545915 | Juvenile tuber | 4.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.570 |
| SRR5643514 | five period of Gastrodia elata | 6.890 | |
| SRR5643515 | five period of Gastrodia elata | 5.940 | |
| SRR5643524 | five period of Gastrodia elata | 7.350 | |
| SRR5643525 | five period of Gastrodia elata | 11.600 | |
| SRR5643528 | five period of Gastrodia elata | 6.150 | |
| SRR5643658 | five period of Gastrodia elata | 7.900 | |
| SRR5643659 | five period of Gastrodia elata | 7.320 | |
| SRR5643660 | five period of Gastrodia elata | 6.830 | |
| SRR5643661 | five period of Gastrodia elata | 4.330 | |
| SRR5643662 | five period of Gastrodia elata | 7.550 | |
| SRR5643663 | five period of Gastrodia elata | 8.460 | |
| SRR5643664 | five period of Gastrodia elata | 9.130 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.870 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.630 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.880 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.040 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.290 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.020 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.190 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.210 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.810 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.220 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.220 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.45 |
| Juven | Juvenile tuber | 7.52 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 11.98 | |
| Mother_Juven | Mother tuber of Juvenile | 10.15 |