Detail information of GWHGAAEX009175/evm.TU.scaffold_238.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34526.00E-5360S ribosomal protein L36
nrgi|695065500|ref|XP_009421339.1|5.36E-66PREDICTED: 60S ribosomal protein L36-3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LZ57|RL363_ARATH2.00E-5360S ribosomal protein L36-3
trEMBLtr|M0RHZ1|M0RHZ1_MUSAM2.00E-6660S ribosomal protein L36 {ECO:0000256|RuleBase:RU000665}
TAIRAT5G024506.00E-53Ribosomal protein L36e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000243831609844144+
Transcript Sequence

Network for GWHGAAEX009175

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01158.17Ribosomal_L36e3324254.40E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02920RP-L36e, RPL36 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.830
SRR2545915Juvenile tuber29.590
SRP108465SRR5643513five period of Gastrodia elata49.870
SRR5643514five period of Gastrodia elata53.100
SRR5643515five period of Gastrodia elata44.250
SRR5643524five period of Gastrodia elata48.840
SRR5643525five period of Gastrodia elata28.470
SRR5643528five period of Gastrodia elata26.970
SRR5643658five period of Gastrodia elata18.790
SRR5643659five period of Gastrodia elata59.300
SRR5643660five period of Gastrodia elata58.800
SRR5643661five period of Gastrodia elata70.110
SRR5643662five period of Gastrodia elata48.630
SRR5643663five period of Gastrodia elata57.830
SRR5643664five period of Gastrodia elata61.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.200
SRR6049655Rhizomagastrodiae_C368-T10_good_152.990
SRR6049656Rhizomagastrodiae_C368-T07_good_132.120
SRR6049657Rhizomagastrodiae_C368-T07_good_125.260
SRR6049658Rhizomagastrodiae_C368-T04_good_117.000
SRR6049659Rhizomagastrodiae_C368-T04_good_116.440
SRR6049660Rhizomagastrodiae_C368-T01_good_119.670
SRR6049661Rhizomagastrodiae_C368-T04_good_120.210
SRR6049662Rhizomagastrodiae_C368-T01_good_123.090
SRR6049663Rhizomagastrodiae_C368-T01_good_118.910
SRR6049664Rhizomagastrodiae_C368-T10_good_136.080
SRR6049665Rhizomagastrodiae_C368-T10_good_136.080
SRP279888GastroGastrodia elata tuber 54.39
JuvenJuvenile tuber48.28
Mother_GastroMother tuber of Gastrodia elata 21.49
Mother_JuvenMother tuber of Juvenile 30.41