Detail information of GWHGAAEX009188/evm.TU.scaffold_239.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|71905875|ref|YP_283462.1|5.00E-161phosphoglyceromutase [Dechloromonas aromatica RCB]
KOGKOG45130Phosphoglycerate mutase
nrgi|743789069|ref|XP_010922826.1|0PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Elaeis guineensis]
Swissprottr|Q42908|PMGI_MESCR02,3-bisphosphoglycerate-independent phosphoglycerate mutase
trEMBLtr|M0RMD9|M0RMD9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P29150_001}
TAIRAT3G085900Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000236765597777198-
Transcript Sequence

Network for GWHGAAEX009188

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01676.17Metalloenzyme205084.60E-89
PF06415.12iPGM_N1023221.70E-56
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15633gpmI Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0006007Biological Processglucose catabolic process
GO:0003824Molecular Functioncatalytic activity
GO:0046872Molecular Functionmetal ion binding
GO:0030145Molecular Functionmanganese ion binding
GO:0004619Molecular Functionphosphoglycerate mutase activity
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms98.090
SRR2545915Juvenile tuber150.560
SRP108465SRR5643513five period of Gastrodia elata151.520
SRR5643514five period of Gastrodia elata122.520
SRR5643515five period of Gastrodia elata161.740
SRR5643524five period of Gastrodia elata142.330
SRR5643525five period of Gastrodia elata158.160
SRR5643528five period of Gastrodia elata327.190
SRR5643658five period of Gastrodia elata125.480
SRR5643659five period of Gastrodia elata154.840
SRR5643660five period of Gastrodia elata140.250
SRR5643661five period of Gastrodia elata156.480
SRR5643662five period of Gastrodia elata179.980
SRR5643663five period of Gastrodia elata161.100
SRR5643664five period of Gastrodia elata122.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1117.650
SRR6049655Rhizomagastrodiae_C368-T10_good_1123.540
SRR6049656Rhizomagastrodiae_C368-T07_good_1135.200
SRR6049657Rhizomagastrodiae_C368-T07_good_194.120
SRR6049658Rhizomagastrodiae_C368-T04_good_188.260
SRR6049659Rhizomagastrodiae_C368-T04_good_181.890
SRR6049660Rhizomagastrodiae_C368-T01_good_1105.800
SRR6049661Rhizomagastrodiae_C368-T04_good_198.910
SRR6049662Rhizomagastrodiae_C368-T01_good_1189.870
SRR6049663Rhizomagastrodiae_C368-T01_good_1147.540
SRR6049664Rhizomagastrodiae_C368-T10_good_1209.860
SRR6049665Rhizomagastrodiae_C368-T10_good_1209.860
SRP279888GastroGastrodia elata tuber 138.56
JuvenJuvenile tuber224.23
Mother_GastroMother tuber of Gastrodia elata 262.23
Mother_JuvenMother tuber of Juvenile 636.99