Detail information of GWHGAAEX009189/evm.TU.scaffold_239.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|372488817|ref|YP_005028382.1|2.00E-182,3-bisphosphoglycerate-independent phosphoglycerate mutase [Dechlorosoma suillum PS]
KOGKOG45138.00E-50Phosphoglycerate mutase
nrgi|672183874|ref|XP_008812232.1|9.47E-57PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like isoform X1 [Phoenix dactylifera]
Swissprottr|P30792|PMGI_MAIZE1.00E-542,3-bisphosphoglycerate-independent phosphoglycerate mutase
trEMBLtr|M0RMD9|M0RMD9_MUSAM2.00E-56Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P29150_001}
TAIRAT3G085908.00E-50Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000236805634846504+
Transcript Sequence

Network for GWHGAAEX009189

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01676.17Metalloenzyme1001688.60E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15633gpmI Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0046872Molecular Functionmetal ion binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.530
SRR2545915Juvenile tuber20.240
SRP108465SRR5643513five period of Gastrodia elata34.400
SRR5643514five period of Gastrodia elata26.010
SRR5643515five period of Gastrodia elata20.360
SRR5643524five period of Gastrodia elata21.360
SRR5643525five period of Gastrodia elata19.450
SRR5643528five period of Gastrodia elata37.070
SRR5643658five period of Gastrodia elata25.310
SRR5643659five period of Gastrodia elata20.790
SRR5643660five period of Gastrodia elata24.090
SRR5643661five period of Gastrodia elata24.160
SRR5643662five period of Gastrodia elata28.420
SRR5643663five period of Gastrodia elata29.670
SRR5643664five period of Gastrodia elata17.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.060
SRR6049655Rhizomagastrodiae_C368-T10_good_18.840
SRR6049656Rhizomagastrodiae_C368-T07_good_113.960
SRR6049657Rhizomagastrodiae_C368-T07_good_116.350
SRR6049658Rhizomagastrodiae_C368-T04_good_110.580
SRR6049659Rhizomagastrodiae_C368-T04_good_110.640
SRR6049660Rhizomagastrodiae_C368-T01_good_113.120
SRR6049661Rhizomagastrodiae_C368-T04_good_16.810
SRR6049662Rhizomagastrodiae_C368-T01_good_115.760
SRR6049663Rhizomagastrodiae_C368-T01_good_115.300
SRR6049664Rhizomagastrodiae_C368-T10_good_122.050
SRR6049665Rhizomagastrodiae_C368-T10_good_122.050
SRP279888GastroGastrodia elata tuber 13.11
JuvenJuvenile tuber25.85
Mother_GastroMother tuber of Gastrodia elata 17.85
Mother_JuvenMother tuber of Juvenile 41.98