Detail information of GWHGAAEX009190/evm.TU.scaffold_24.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383787752|ref|YP_005472320.1|4.00E-19putative ABC transporter ATP-binding protein [Caldisericum exile AZM16c01]
KOGKOG23553.00E-173Predicted ABC-type transport, ATPase component/CCR4 associated factor
nrgi|604299520|gb|EYU19415.1|0hypothetical protein MIMGU_mgv1a010002mg [Erythranthe guttata]
Swissprottr|Q9LZ98|AB20I_ARATH9.00E-174ABC transporter I family member 20
trEMBLtr|A0A022PYV4|A0A022PYV4_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU19415.1}
TAIRAT5G022703.00E-173non-intrinsic ABC protein 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000021106989148897+
Transcript Sequence

Network for GWHGAAEX009190

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.26ABC_tran441896.40E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12608CAF16 RNA degradation map03018

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding
GO:0016887Molecular FunctionATPase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms60.980
SRR2545915Juvenile tuber75.140
SRP108465SRR5643513five period of Gastrodia elata85.060
SRR5643514five period of Gastrodia elata103.510
SRR5643515five period of Gastrodia elata90.780
SRR5643524five period of Gastrodia elata98.160
SRR5643525five period of Gastrodia elata74.230
SRR5643528five period of Gastrodia elata72.980
SRR5643658five period of Gastrodia elata56.260
SRR5643659five period of Gastrodia elata188.310
SRR5643660five period of Gastrodia elata143.050
SRR5643661five period of Gastrodia elata116.080
SRR5643662five period of Gastrodia elata255.000
SRR5643663five period of Gastrodia elata257.460
SRR5643664five period of Gastrodia elata307.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.150
SRR6049655Rhizomagastrodiae_C368-T10_good_153.920
SRR6049656Rhizomagastrodiae_C368-T07_good_156.910
SRR6049657Rhizomagastrodiae_C368-T07_good_162.820
SRR6049658Rhizomagastrodiae_C368-T04_good_165.480
SRR6049659Rhizomagastrodiae_C368-T04_good_165.060
SRR6049660Rhizomagastrodiae_C368-T01_good_154.390
SRR6049661Rhizomagastrodiae_C368-T04_good_166.190
SRR6049662Rhizomagastrodiae_C368-T01_good_155.530
SRR6049663Rhizomagastrodiae_C368-T01_good_159.360
SRR6049664Rhizomagastrodiae_C368-T10_good_166.320
SRR6049665Rhizomagastrodiae_C368-T10_good_166.320
SRP279888GastroGastrodia elata tuber 116.68
JuvenJuvenile tuber125.99
Mother_GastroMother tuber of Gastrodia elata 85.70
Mother_JuvenMother tuber of Juvenile 121.97