Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|337285929\|ref\|YP_004625402.1\|	7.00E-37	argininosuccinate synthase [Thermodesulfatator indicus DSM 15286]
KOG	KOG1706	4.00E-51	Argininosuccinate synthase
nr	gi\|186513287\|ref\|NP_001119047.1\|	1.32E-59	argininosuccinate synthase [Arabidopsis thaliana]
Swissprot	tr\|Q9SZX3\|ASSY_ARATH	7.00E-51	Argininosuccinate synthase, chloroplastic (Precursor)
trEMBL	tr\|M0S9T3\|M0S9T3_MUSAM	7.00E-65	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P20920_001}
TAIR	AT4G24830	4.00E-51	arginosuccinate synthase family

Scaffold	Start	End	Strand
GWHAAEX00000021	848164	850962	-

Transcript Sequence
>GWHTAAEX009199 ATGAGGGAGGCAGAAGTGATGAAAACTGTCAGGAATTTTCAGCTGCTCCCATTAGTGCTAGATTATGTGGCAGAAGCATGTCTTAGCGGGAATCAGTCCTTATATTGTGGTGATATTTTGGAAGACCCTGCCAATGAGCCTAAGAAGGAGATGTACATGCTGACCGTTGATCCAGAAGATGCACCTGATCAACCTGAGTACGTTGAGATCGGCAGCGTGTCGGGCATTCCGGTGTCCGTCAGCGGAAGGGAGCTGTCGCTGGCATCCCTTCTGTCGGAGCTGAATGAGATCGGTGGGAGGCACGGGATTGGCAGAATCGACATGGTCGAGAACCGGCTGGTGGTTCGACCCCCTCCGGGAGTCCATAGATGCGTTCATGGAGAAGCTGGAGGAAACAACGACGGGTCAGTTAAACTGAAGCTGTACAAAGGGTCAGTGACGGCGACCTCCCGGATGAGCCCTATGAGCTTGTATAGGGAGGGCATCTCGTCCTTTGAGATCCGCAGCATCTACAACCAGGCTGATGCTGCTGGCTTCATCCAGCTCTACAGCTTGCCTCTCAGAGTCAGTGCAATGCTTGGAAAGGAGACCGCCTCTCAGTTGCGACTTGCTATTTGTCTATCGTTACATTTGTATGCTGCTGTCTTTAAGGCAATTGATATTGGGCTAGCAATCTATAGAAAGCTCCTCTCCCTCCATATTTGCACTGTGAGATGTTATAAAAACTTCGCCCGACAATCTATCGCAAGCGATCTTCGCGTTCCTTCTCCCGAAGCTCGCATCCGCCAGACGGAGCGCCAGTGCTCGGCCTTGGTTTCGCCTCGCCGAGGCAGATCCACCAGATGCAGCGTCGGTGCTTCGCCTTCACTTCGCCTCGCCGATTTCGTCAACGTAGGTGCTCCGCCTTCGCTTCACTTCCCATTCCCATTCACTTCATTTTTTGATGGGTGTTTTTTCGAAGATTTGCTTGATATTGCCAGTTGA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00764.18	Arginosuc_synth	36	114	3.20E-24
PF00764.18	Arginosuc_synth	134	189	3.20E-10

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K01940	argG, ASS1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Biosynthesis of antibiotics	map01130
		Biosynthesis of amino acids	map01230
		Pyrimidine metabolism	map00240
		Arginine biosynthesis	map00220

GO term	Ontology	Name
GO:0006526	Biological Process	arginine biosynthetic process
GO:0005524	Molecular Function	ATP binding
GO:0004055	Molecular Function	argininosuccinate synthase activity

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.820
SRP064423	SRR2545915	Juvenile tuber	4.110
SRP108465	SRR5643513	five period of Gastrodia elata	3.130
	SRR5643514	five period of Gastrodia elata	4.890
	SRR5643515	five period of Gastrodia elata	5.480
	SRR5643524	five period of Gastrodia elata	4.330
	SRR5643525	five period of Gastrodia elata	3.100
	SRR5643528	five period of Gastrodia elata	4.840
	SRR5643658	five period of Gastrodia elata	5.180
	SRR5643659	five period of Gastrodia elata	5.100
	SRR5643660	five period of Gastrodia elata	11.130
	SRR5643661	five period of Gastrodia elata	5.330
	SRR5643662	five period of Gastrodia elata	4.680
	SRR5643663	five period of Gastrodia elata	6.580
	SRR5643664	five period of Gastrodia elata	5.780
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.480
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.390
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.920
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.020
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.910
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.330
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.980
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.980
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.830
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.910
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.430
SRP279888	Gastro	Gastrodia elata tuber	2.99
	Juven	Juvenile tuber	2.19
	Mother_Gastro	Mother tuber of Gastrodia elata	1.16
	Mother_Juven	Mother tuber of Juvenile	2.14