Detail information of GWHGAAEX009205/evm.TU.scaffold_24.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428317844|ref|YP_007115726.1|4.00E-07serine/threonine protein kinase with TPR repeats [Oscillatoria nigro-viridis PCC 7112]
KOGKOG41620Predicted calmodulin-binding protein
nrgi|743855592|ref|XP_010941503.1|0PREDICTED: uncharacterized protein LOC105059771 isoform X2 [Elaeis guineensis]
Swissprottr|Q96301|SPY_ARATH8.00E-06Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
trEMBLtr|M0S0A7|M0S0A7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P15990_001}
TAIRAT2G430400tetratricopeptide repeat (TPR)-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002113042511329136-
Transcript Sequence

Network for GWHGAAEX009205

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.210
SRR2545915Juvenile tuber17.430
SRP108465SRR5643513five period of Gastrodia elata20.750
SRR5643514five period of Gastrodia elata19.480
SRR5643515five period of Gastrodia elata18.770
SRR5643524five period of Gastrodia elata20.260
SRR5643525five period of Gastrodia elata10.840
SRR5643528five period of Gastrodia elata13.990
SRR5643658five period of Gastrodia elata11.680
SRR5643659five period of Gastrodia elata12.570
SRR5643660five period of Gastrodia elata12.750
SRR5643661five period of Gastrodia elata12.690
SRR5643662five period of Gastrodia elata14.230
SRR5643663five period of Gastrodia elata11.780
SRR5643664five period of Gastrodia elata12.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.360
SRR6049655Rhizomagastrodiae_C368-T10_good_122.210
SRR6049656Rhizomagastrodiae_C368-T07_good_122.880
SRR6049657Rhizomagastrodiae_C368-T07_good_118.550
SRR6049658Rhizomagastrodiae_C368-T04_good_119.090
SRR6049659Rhizomagastrodiae_C368-T04_good_121.040
SRR6049660Rhizomagastrodiae_C368-T01_good_115.330
SRR6049661Rhizomagastrodiae_C368-T04_good_118.590
SRR6049662Rhizomagastrodiae_C368-T01_good_121.710
SRR6049663Rhizomagastrodiae_C368-T01_good_119.280
SRR6049664Rhizomagastrodiae_C368-T10_good_132.180
SRR6049665Rhizomagastrodiae_C368-T10_good_132.180
SRP279888GastroGastrodia elata tuber 14.82
JuvenJuvenile tuber21.68
Mother_GastroMother tuber of Gastrodia elata 37.23
Mother_JuvenMother tuber of Juvenile 37.18