Detail information of GWHGAAEX009215/evm.TU.scaffold_24.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|85373572|ref|YP_457634.1|7.00E-11syrP protein [Erythrobacter litoralis HTCC2594]
nrgi|586779337|ref|XP_006858502.1|1.53E-36hypothetical protein AMTR_s00071p00132190 [Amborella trichopoda]
Swissprottr|Q9LIG0|Y3136_ARATH1.00E-21Clavaminate synthase-like protein At3g21360
trEMBLtr|U5DBR7|U5DBR7_AMBTC6.00E-37Uncharacterized protein {ECO:0000313|EMBL:ERN19969.1}
TAIRAT3G213604.00E-212-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002124346172434934+
Transcript Sequence

Network for GWHGAAEX009215

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02668.15TauD481045.40E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.510
SRR2545915Juvenile tuber1.700
SRP108465SRR5643513five period of Gastrodia elata10.190
SRR5643514five period of Gastrodia elata5.190
SRR5643515five period of Gastrodia elata2.680
SRR5643524five period of Gastrodia elata2.790
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata1.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.070
SRR6049655Rhizomagastrodiae_C368-T10_good_130.010
SRR6049656Rhizomagastrodiae_C368-T07_good_124.070
SRR6049657Rhizomagastrodiae_C368-T07_good_17.530
SRR6049658Rhizomagastrodiae_C368-T04_good_142.270
SRR6049659Rhizomagastrodiae_C368-T04_good_136.820
SRR6049660Rhizomagastrodiae_C368-T01_good_19.280
SRR6049661Rhizomagastrodiae_C368-T04_good_123.720
SRR6049662Rhizomagastrodiae_C368-T01_good_140.110
SRR6049663Rhizomagastrodiae_C368-T01_good_137.820
SRR6049664Rhizomagastrodiae_C368-T10_good_132.400
SRR6049665Rhizomagastrodiae_C368-T10_good_132.400
SRP279888GastroGastrodia elata tuber 17.41
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 19.16
Mother_JuvenMother tuber of Juvenile 0.00