Detail information of GWHGAAEX009218/evm.TU.scaffold_24.57


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695079456|ref|XP_009387150.1|1.40E-15PREDICTED: hepatoma-derived growth factor-related protein 2-like [Musa acuminata subsp. malaccensis]
trEMBLtr|M0U9I8|M0U9I8_MUSAM8.00E-16Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP15790_001}
TAIRAT2G256504.00E-11DNA-binding storekeeper protein-related transcriptional regulator

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002126730632674599+
Transcript Sequence

Network for GWHGAAEX009218

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04504.13DUF5732573519.60E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGeBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.170
SRR2545915Juvenile tuber25.790
SRP108465SRR5643513five period of Gastrodia elata44.260
SRR5643514five period of Gastrodia elata46.670
SRR5643515five period of Gastrodia elata34.560
SRR5643524five period of Gastrodia elata43.770
SRR5643525five period of Gastrodia elata39.450
SRR5643528five period of Gastrodia elata37.250
SRR5643658five period of Gastrodia elata32.700
SRR5643659five period of Gastrodia elata56.240
SRR5643660five period of Gastrodia elata57.200
SRR5643661five period of Gastrodia elata48.590
SRR5643662five period of Gastrodia elata55.740
SRR5643663five period of Gastrodia elata49.920
SRR5643664five period of Gastrodia elata48.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.500
SRR6049655Rhizomagastrodiae_C368-T10_good_160.550
SRR6049656Rhizomagastrodiae_C368-T07_good_147.190
SRR6049657Rhizomagastrodiae_C368-T07_good_137.330
SRR6049658Rhizomagastrodiae_C368-T04_good_132.940
SRR6049659Rhizomagastrodiae_C368-T04_good_137.490
SRR6049660Rhizomagastrodiae_C368-T01_good_140.850
SRR6049661Rhizomagastrodiae_C368-T04_good_135.570
SRR6049662Rhizomagastrodiae_C368-T01_good_146.140
SRR6049663Rhizomagastrodiae_C368-T01_good_142.790
SRR6049664Rhizomagastrodiae_C368-T10_good_160.040
SRR6049665Rhizomagastrodiae_C368-T10_good_160.040
SRP279888GastroGastrodia elata tuber 59.84
JuvenJuvenile tuber80.66
Mother_GastroMother tuber of Gastrodia elata 21.83
Mother_JuvenMother tuber of Juvenile 36.08