Gene detail

Detail information of GWHGAAEX009219/evm.TU.scaffold_24.60

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|145299239\|ref\|YP_001142080.1\|	4.00E-21	enoyl-CoA hydrotase [Aeromonas salmonicida subsp. salmonicida A449]
KOG	KOG1206	1.00E-50	Peroxisomal multifunctional beta-oxidation protein and related enzymes
nr	gi\|743825690\|ref\|XP_010933089.1\|	1.15E-65	PREDICTED: hydroxyacyl-thioester dehydratase type 2, mitochondrial [Elaeis guineensis]
trEMBL	tr\|M0SL55\|M0SL55_MUSAM	2.00E-64	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P04880_001}
TAIR	AT5G60340_2	1.00E-50	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000021	2820301	2839682	-

Transcript Sequence
>GWHTAAEX009219 AAGTAATAAGCTGTGTAGTGGGAAATTGGTTCCATCTCAATATTAAAAAATAATATAGCGGTAACCGGTGCTTCTCTCCCTCCGTCATGAATCTGAGCCGCCTTATCCGAAGCTCTAAGTGCCCTCGTGCTGTGGCTGCTTTAGCTGCTTTGTCTTCGTCATCGACGGCTGAGTCAAGACGGCCTCTGATGGCTGGTGACGTGCTGAGGGACGTACGGCGTTTCTCAGCCGATGACGTGGCGTCGTACGCCGGTGTTAGTAGGGATCAGAATCCGGTCCATTTGGACCCCGAGTTCGCCCGTCGGATCGCCGGATTTGATCGCGGAAGCATCGTCCACGGCATGCTCGTAGCCTCAATCTTTCCCTCCGTCATTGCATCCCACTTTCCCGGAGCTGTTTATGTTTCTCAAACTATACAATTTAAGTTGCCGGTCTATGTCAACGATGAGGTGGCTGCCGAACTGCAAGCTATAAATCTGAGGGAGCATAAGAAAAAATACATAGTAAAGTTTACTACGAAATGCTTCATGGGTGAAAAATGTCTTGTTGTTGATGGGGAAGCTGTTACCATTTTACCAACACTTATTCCAAACAAATAGAAAAAATCTCAAAACACGTCTATGAGTTGGCATTGATCGCTTGTAAGAAGGGATCGATGGTCATTTAACAAAAGAAACAACGTTTATAGAACAGTTGGTTGAAGATGAAAGCCAAATGGAGGGTTTGCCTCACAGTTGCTCAAAGGTCATGAATTGGCACCTTCATTTAGAAGCTAAACAACTTGTTTATCCCAAACGGTGGCAAGTTTCATCAGGACTCGATGCTGTTTCAAATGCAGGATCTATAAGCTTTCCATAGTCCCTCCTTTGGAATAATTCTTATATTGTTAGATCAATCCCCAATGTTGGAAACTGGCAATGATGTCCTACTTGCACAAAGTGATCAATCCAAGAAGGGAAGCCCATTTGGCTGCTCTGCCCTTTTGCTGCAGCGAAGGCATGCATCACTGGATTTTCTTCTATTACTGGCGACTGAAAAAAGCTTCGAAGGAAAGGCAGCTCAGTTAAAGCGGTAAAATTGATTTTCTTTCATTCTTTTTTCTTAAACAAATTTGTTGTTAGAAAATAATAAATGGTTATTTGTTATTCGGTTAAATGAAAGTGCTGCTATACTATCCAAAAGCATTCTCAAGATTTTTTAAAAGTATAGAATAGGTGTTATGCGTTATTTTGGGATGAGTAATGTTATATGCCTACCTCAAAACCTCTCAAACAAGAGGTGATATGACCATTTATTAGTCCATGATCTTTTACTTTGGAGTGATTTTGAGGCATTTATTTGTTGGAGGTGGAATATTCTTTTTCAGAAGAAAGAGTATGAAGAAGAATGATTTAATGCCACATTCTATATCTCAAAGGGGCTACAAAGTAGGGTATGTTAGCCTAAAGACTGCAACCATCTTGACATGAGTTTTTTCAAAAGAATTGGACTTAATAAGTTGATGAACTAAGCATAGTCTAAGTAGGATTTTTTTTTTTTGTAGAGGTTAAGCTATATAAGTCAAATTTATGTATTTAAATTTATGTATTTAAATTGTTGATAACTAAATGTTGGTGTTTTAAGCTTGTCACAAATTTGCATCATGCATATTTTGTTTTGTATAACAATAAATTTTCTTGTTTTT

Network for GWHGAAEX009219

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01575.18	MaoC_dehydratas	44	138	3.70E-20

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	26.340
SRP064423	SRR2545915	Juvenile tuber	12.570
SRP108465	SRR5643513	five period of Gastrodia elata	4.220
	SRR5643514	five period of Gastrodia elata	3.330
	SRR5643515	five period of Gastrodia elata	3.040
	SRR5643524	five period of Gastrodia elata	3.660
	SRR5643525	five period of Gastrodia elata	6.050
	SRR5643528	five period of Gastrodia elata	4.880
	SRR5643658	five period of Gastrodia elata	5.280
	SRR5643659	five period of Gastrodia elata	4.350
	SRR5643660	five period of Gastrodia elata	4.180
	SRR5643661	five period of Gastrodia elata	4.650
	SRR5643662	five period of Gastrodia elata	5.500
	SRR5643663	five period of Gastrodia elata	4.960
	SRR5643664	five period of Gastrodia elata	6.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.910
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.190
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.760
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.560
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.770
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.500
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.190
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.460
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.590
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.490
SRP279888	Gastro	Gastrodia elata tuber	7.52
	Juven	Juvenile tuber	7.17
	Mother_Gastro	Mother tuber of Gastrodia elata	7.63
	Mother_Juven	Mother tuber of Juvenile	7.78