Gene detail

Detail information of GWHGAAEX009223/evm.TU.scaffold_24.72

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|337749462\|ref\|YP_004643624.1\|	2.00E-34	cytochrome P450 hydroxylase [Paenibacillus mucilaginosus KNP414]
KOG	KOG0156	4.00E-146	Cytochrome P450 CYP2 subfamily
nr	gi\|195547007\|gb\|ACC59773.2\|	0	flavonoid 3',5' hydroxylase-like protein [Vanda coerulea]
Swissprot	tr\|Q8VWZ7\|C76B6_CATRO	3.00E-162	Geraniol 8-hydroxylase
trEMBL	tr\|B2LUN8\|B2LUN8_9ASPA	0	Flavonoid 3',5' hydroxylase-like protein {ECO:0000313\|EMBL:ACC59773.2}
TAIR	AT2G45550	4.00E-146	cytochrome P450, family 76, subfamily C, polypeptide 4

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000021	3412804	3414554	-

Transcript Sequence
>GWHTAAEX009223 AATAGCATGGAAGAATTCCCTCTCCATTACCTTCTTTGGTTGGTCATATTGCTTGCTCTCTCATTTCTTTTTCATTCAAACAGCAAGCAGAAACGTTCATTCCGCGCTCACCGTCTCCCACCGGGCCCAAAAGGGCTACCAATTATAGGGAACCTTCTTGAGCTGGGCCAAAATCCCCACCGTTCCTTCGCCCGCCTCTCTAGAACCTATGGCCCAATCATGTTTCTGAGGCTCGGCAGCGTCAAAACCATCGTCATCTCCTCTCCCGCCTTAGCCAAAGAAGTCCTTCTAACCAAAGAACGCACCCTTTCCAGCCGCCACATCCCCGACTCCATGAAAGGCGACGACCACTACAAGTTGTCCGTAGCATGGATTCCTACGAATGAAACCTGGCGGTATCTCCGCACTCTCTTGAAAAATCATCTCTTCAACAAACCCTCGCTCGGCACAACCGAATCGCTCCGCCGGCGTAAAATTCAGAAACTCACCGAATTTATCAGAGGGGAGCAGGGGAAGCCCATAGACATTGGTCGAGCTGCCTTTTGTACTATGCTAAATATTATTTCCACGACAATATTCTCTATGGATATCTTGAATTTTAAATCTGATTCGTCTCAAGAGTTAAAGGATTTGGTGTGGGCTGTCATGAAAGAAACTGGAAAACCTAATCTCTCTGATTTCTTTCCCTTTCTAGCACCTTTTGACTTACAAGGGCGGAGGCGAAGGTCTGCAGTGCACCTTAAGAAGTTGGCCGATTTATTCGATCAAATGATTAAAAAACGAGCGGAAGAATCGACATACGAGGATAGGGAAAGAACCGATAATGATGTGTTAGATGTGCTTCTTCAGCTCAATAAAGAAAATGACTCCAAACTTAGTAGGGGCACTATAATATCATTGTTTGTGGACTCGTTTGTCGCTGGTACAGAAACAAGCTCAGCCACTGTAGAGTGGGCGATGGCTGAATTACTTCGACGGCCAGAGCTTATGATGATGGCTCGGAAAGAGATTGCGGCAGTTATCGGATTCGGGAGAGAAGTGGAGGAATCCGATATCTCACGACTTCCATTTCTCCAAGCAGTGTTGAAGGAGACACTTCGACTTCATCCTCCGGTTCCGCTTCTGTTGCCTCACAGAGCGGAAGAGGACACAGAGGTCAATGGCTACATGTTGTTGGAGAACAGTCAAGTGCTAGTCAACGTGTGGGCTATAGGTCGAGATGAGAATGTTTGGGATAGCCCTGGTCAGTTCATGCCGGAGAGATTTATGAGCGGGGGGAAAGGCGAAATTGATTATAAAGGTCAATACTTCGAGCTCATACCATTTGGCTCAGGACGACGAATCTGTCCCGGTATGATATATGGTGTACGAATGGTTCAACTCATGCTTGCCTCACTCATTCAGTCCTTCGAATGGAGATTAGACAGAAAGGACTTGGATATGACGGAGAAGTTTGGTATAACACTTTCCATGGCTTCTCCTCTAAAGGCCTTTGCCACTCCCACTGCTGCAATTTGATGCTTTTTGTAATCAAAACTCTTAATATGATAAACGTTAAGTATATTATATTAAAATAAATAAAAAAGTAAGTTTGATGTGAGATAATCTACCACAAAGGAAACCTAAAAAAAAAAATTCAATAGGTACCTATGCTCTAAAGAAAAAAGCATCAAATTGAT

Network for GWHGAAEX009223

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	38	483	5.00E-103

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP76C2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	Molecular Function	heme binding
GO:0005506	Molecular Function	iron ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.140
SRP064423	SRR2545915	Juvenile tuber	7.330
SRP108465	SRR5643513	five period of Gastrodia elata	0.960
	SRR5643514	five period of Gastrodia elata	2.440
	SRR5643515	five period of Gastrodia elata	0.310
	SRR5643524	five period of Gastrodia elata	0.560
	SRR5643525	five period of Gastrodia elata	0.140
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	1.180
	SRR5643660	five period of Gastrodia elata	1.710
	SRR5643661	five period of Gastrodia elata	0.700
	SRR5643662	five period of Gastrodia elata	0.300
	SRR5643663	five period of Gastrodia elata	0.290
	SRR5643664	five period of Gastrodia elata	0.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.300
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.850
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.380
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.830
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.830
SRP279888	Gastro	Gastrodia elata tuber	2.76
	Juven	Juvenile tuber	39.53
	Mother_Gastro	Mother tuber of Gastrodia elata	1.07
	Mother_Juven	Mother tuber of Juvenile	3.89