Detail information of GWHGAAEX009224/evm.TU.scaffold_24.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16579.00E-23CCAAT-binding factor, subunit C (HAP5)
nrgi|720027873|ref|XP_010264713.1|1.40E-31PREDICTED: uncharacterized protein LOC104602644 [Nelumbo nucifera]
trEMBLtr|D6MK76|D6MK76_9ASPA6.00E-40Transcription factor {ECO:0000313|EMBL:ADG57923.1} (Fragment)
TAIRAT1G079809.00E-23nuclear factor Y, subunit C10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002137196193734964-
Transcript Sequence

Network for GWHGAAEX009224

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00808.22CBFD_NFYB_HMF581256.80E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms56.150
SRR2545915Juvenile tuber51.750
SRP108465SRR5643513five period of Gastrodia elata25.320
SRR5643514five period of Gastrodia elata28.120
SRR5643515five period of Gastrodia elata28.210
SRR5643524five period of Gastrodia elata27.430
SRR5643525five period of Gastrodia elata40.340
SRR5643528five period of Gastrodia elata31.270
SRR5643658five period of Gastrodia elata29.870
SRR5643659five period of Gastrodia elata45.250
SRR5643660five period of Gastrodia elata55.010
SRR5643661five period of Gastrodia elata53.050
SRR5643662five period of Gastrodia elata58.890
SRR5643663five period of Gastrodia elata53.880
SRR5643664five period of Gastrodia elata64.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.490
SRR6049655Rhizomagastrodiae_C368-T10_good_147.420
SRR6049656Rhizomagastrodiae_C368-T07_good_133.220
SRR6049657Rhizomagastrodiae_C368-T07_good_141.090
SRR6049658Rhizomagastrodiae_C368-T04_good_136.790
SRR6049659Rhizomagastrodiae_C368-T04_good_139.950
SRR6049660Rhizomagastrodiae_C368-T01_good_134.040
SRR6049661Rhizomagastrodiae_C368-T04_good_132.540
SRR6049662Rhizomagastrodiae_C368-T01_good_129.340
SRR6049663Rhizomagastrodiae_C368-T01_good_130.540
SRR6049664Rhizomagastrodiae_C368-T10_good_128.140
SRR6049665Rhizomagastrodiae_C368-T10_good_128.140
SRP279888GastroGastrodia elata tuber 69.93
JuvenJuvenile tuber46.54
Mother_GastroMother tuber of Gastrodia elata 25.46
Mother_JuvenMother tuber of Juvenile 30.00