Detail information of GWHGAAEX009225/evm.TU.scaffold_24.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00272.00E-27Calmodulin and related proteins (EF-Hand superfamily)
nrgi|695080067|ref|XP_009387474.1|1.53E-38PREDICTED: calmodulin-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8RZB5|CML10_ORYSJ9.00E-16Probable calcium-binding protein CML10
trEMBLtr|C6T3P6|C6T3P6_SOYBN4.00E-34Putative uncharacterized protein {ECO:0000313|EMBL:ACU16284.1}
TAIRAT5G494802.00E-27Ca2+-binding protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002138092963809733+
Transcript Sequence

Network for GWHGAAEX009225

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_72615.20E-10
PF00036.31EF-hand_1741005.20E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02183CALM Ras signaling pathway map04014
Rap1 signaling pathwaymap04015
MAPK signaling pathway - plantmap04016
Apelin signaling pathwaymap04371
Calcium signaling pathwaymap04020
Phosphatidylinositol signaling systemmap04070
cAMP signaling pathwaymap04024
cGMP-PKG signaling pathwaymap04022
Oocyte meiosismap04114
Cellular senescencemap04218
C-type lectin receptor signaling pathwaymap04625
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
GnRH signaling pathwaymap04912
Estrogen signaling pathwaymap04915
Oxytocin signaling pathwaymap04921
Melanogenesismap04916
Renin secretionmap04924
Aldosterone synthesis and secretionmap04925
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Salivary secretionmap04970
Gastric acid secretionmap04971
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Neurotrophin signaling pathwaymap04722
Phototransductionmap04744
Phototransduction - flymap04745
Olfactory transductionmap04740
Inflammatory mediator regulation of TRP channelsmap04750
Circadian entrainmentmap04713
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.950
SRR2545915Juvenile tuber11.640
SRP108465SRR5643513five period of Gastrodia elata149.790
SRR5643514five period of Gastrodia elata67.120
SRR5643515five period of Gastrodia elata96.770
SRR5643524five period of Gastrodia elata61.020
SRR5643525five period of Gastrodia elata63.990
SRR5643528five period of Gastrodia elata1046.630
SRR5643658five period of Gastrodia elata156.690
SRR5643659five period of Gastrodia elata49.360
SRR5643660five period of Gastrodia elata71.980
SRR5643661five period of Gastrodia elata72.920
SRR5643662five period of Gastrodia elata43.020
SRR5643663five period of Gastrodia elata30.390
SRR5643664five period of Gastrodia elata68.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.300
SRR6049655Rhizomagastrodiae_C368-T10_good_130.010
SRR6049656Rhizomagastrodiae_C368-T07_good_156.060
SRR6049657Rhizomagastrodiae_C368-T07_good_133.090
SRR6049658Rhizomagastrodiae_C368-T04_good_158.640
SRR6049659Rhizomagastrodiae_C368-T04_good_147.420
SRR6049660Rhizomagastrodiae_C368-T01_good_157.410
SRR6049661Rhizomagastrodiae_C368-T04_good_172.870
SRR6049662Rhizomagastrodiae_C368-T01_good_1110.500
SRR6049663Rhizomagastrodiae_C368-T01_good_175.540
SRR6049664Rhizomagastrodiae_C368-T10_good_177.690
SRR6049665Rhizomagastrodiae_C368-T10_good_177.690
SRP279888GastroGastrodia elata tuber 53.30
JuvenJuvenile tuber5.70
Mother_GastroMother tuber of Gastrodia elata 393.92
Mother_JuvenMother tuber of Juvenile 33.20