Detail information of GWHGAAEX009237/evm.TU.scaffold_24.107


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|313203852|ref|YP_004042509.1|9.00E-159glyceraldehyde-3-phosphate dehydrogenase [Paludibacter propionicigenes WB4]
KOGKOG06570Glyceraldehyde 3-phosphate dehydrogenase
nrgi|410027508|gb|AFV52793.1|0glyceraldehyde 3-phosphate dehydrogenase [Cymbidium faberi]
Swissprottr|Q7FAH2|G3PC2_ORYSJ0Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic
trEMBLtr|K4PDQ2|K4PDQ2_9ASPA0Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}
TAIRAT1G134400glyceraldehyde-3-phosphate dehydrogenase C2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002160297626032194-
Transcript Sequence

Network for GWHGAAEX009237

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00044.23Gp_dh_N2996.10E-29
PF02800.19Gp_dh_C1513081.50E-68
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00134GAPDH, gapA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Carbon fixation in photosynthetic organismsmap00710
HIF-1 signaling pathwaymap04066

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006006Biological Processglucose metabolic process
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0050661Molecular FunctionNADP binding
GO:0051287Molecular FunctionNAD binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.560
SRR2545915Juvenile tuber2.310
SRP108465SRR5643513five period of Gastrodia elata0.090
SRR5643514five period of Gastrodia elata0.140
SRR5643515five period of Gastrodia elata0.170
SRR5643524five period of Gastrodia elata0.150
SRR5643525five period of Gastrodia elata3.660
SRR5643528five period of Gastrodia elata0.640
SRR5643658five period of Gastrodia elata0.410
SRR5643659five period of Gastrodia elata0.150
SRR5643660five period of Gastrodia elata0.160
SRR5643661five period of Gastrodia elata0.250
SRR5643662five period of Gastrodia elata0.080
SRR5643663five period of Gastrodia elata0.430
SRR5643664five period of Gastrodia elata0.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.610
SRR6049655Rhizomagastrodiae_C368-T10_good_10.830
SRR6049656Rhizomagastrodiae_C368-T07_good_10.800
SRR6049657Rhizomagastrodiae_C368-T07_good_12.920
SRR6049658Rhizomagastrodiae_C368-T04_good_10.620
SRR6049659Rhizomagastrodiae_C368-T04_good_10.460
SRR6049660Rhizomagastrodiae_C368-T01_good_10.880
SRR6049661Rhizomagastrodiae_C368-T04_good_10.580
SRR6049662Rhizomagastrodiae_C368-T01_good_112.890
SRR6049663Rhizomagastrodiae_C368-T01_good_13.510
SRR6049664Rhizomagastrodiae_C368-T10_good_14.350
SRR6049665Rhizomagastrodiae_C368-T10_good_14.350
SRP279888GastroGastrodia elata tuber 0.55
JuvenJuvenile tuber1.32
Mother_GastroMother tuber of Gastrodia elata 2.23
Mother_JuvenMother tuber of Juvenile 4.38