Detail information of GWHGAAEX009244/evm.TU.scaffold_24.122


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG03835.00E-16Predicted helicase
nrgi|743759451|ref|XP_010932331.1|1.19E-31PREDICTED: protein CHROMATIN REMODELING 4-like [Elaeis guineensis]
Swissprottr|F4KBP5|CHR4_ARATH2.00E-18Protein CHROMATIN REMODELING 4 {ECO:0000303|PubMed:16547115}
trEMBLtr|F6HF66|F6HF66_VITVI2.00E-26Putative uncharacterized protein {ECO:0000313|EMBL:CCB51022.1}
TAIRAT5G448005.00E-16chromatin remodeling 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002169373426948637-
Transcript Sequence

Network for GWHGAAEX009244

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.770
SRR2545915Juvenile tuber11.140
SRP108465SRR5643513five period of Gastrodia elata3.640
SRR5643514five period of Gastrodia elata6.070
SRR5643515five period of Gastrodia elata4.320
SRR5643524five period of Gastrodia elata7.750
SRR5643525five period of Gastrodia elata7.570
SRR5643528five period of Gastrodia elata10.750
SRR5643658five period of Gastrodia elata12.240
SRR5643659five period of Gastrodia elata7.370
SRR5643660five period of Gastrodia elata4.630
SRR5643661five period of Gastrodia elata6.910
SRR5643662five period of Gastrodia elata6.770
SRR5643663five period of Gastrodia elata7.720
SRR5643664five period of Gastrodia elata6.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.290
SRR6049655Rhizomagastrodiae_C368-T10_good_134.050
SRR6049656Rhizomagastrodiae_C368-T07_good_111.840
SRR6049657Rhizomagastrodiae_C368-T07_good_13.980
SRR6049658Rhizomagastrodiae_C368-T04_good_115.030
SRR6049659Rhizomagastrodiae_C368-T04_good_114.930
SRR6049660Rhizomagastrodiae_C368-T01_good_113.050
SRR6049661Rhizomagastrodiae_C368-T04_good_16.390
SRR6049662Rhizomagastrodiae_C368-T01_good_18.210
SRR6049663Rhizomagastrodiae_C368-T01_good_115.600
SRR6049664Rhizomagastrodiae_C368-T10_good_18.500
SRR6049665Rhizomagastrodiae_C368-T10_good_18.500
SRP279888GastroGastrodia elata tuber 8.60
JuvenJuvenile tuber9.14
Mother_GastroMother tuber of Gastrodia elata 7.58
Mother_JuvenMother tuber of Juvenile 20.81