Detail information of GWHGAAEX009255/evm.TU.scaffold_240.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428203127|ref|YP_007081716.1|6.00E-26iojap-like ribosome-associated protein [Pleurocapsa sp. PCC 7327]
nrgi|672110629|ref|XP_008796472.1|6.60E-79PREDICTED: protein Iojap, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9LDY9|IOJAC_ARATH5.00E-66Protein Iojap, chloroplastic (Precursor)
trEMBLtr|M0SMK3|M0SMK3_MUSAM9.00E-73Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P09860_001}
TAIRAT3G129302.00E-65Lojap-related protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000244625582660025+
Transcript Sequence

Network for GWHGAAEX009255

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02410.14RsfS1062005.00E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.420
SRR2545915Juvenile tuber33.410
SRP108465SRR5643513five period of Gastrodia elata37.350
SRR5643514five period of Gastrodia elata41.230
SRR5643515five period of Gastrodia elata35.420
SRR5643524five period of Gastrodia elata39.660
SRR5643525five period of Gastrodia elata47.500
SRR5643528five period of Gastrodia elata36.730
SRR5643658five period of Gastrodia elata42.330
SRR5643659five period of Gastrodia elata46.440
SRR5643660five period of Gastrodia elata43.220
SRR5643661five period of Gastrodia elata38.440
SRR5643662five period of Gastrodia elata53.530
SRR5643663five period of Gastrodia elata46.620
SRR5643664five period of Gastrodia elata51.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.890
SRR6049655Rhizomagastrodiae_C368-T10_good_152.540
SRR6049656Rhizomagastrodiae_C368-T07_good_142.930
SRR6049657Rhizomagastrodiae_C368-T07_good_144.710
SRR6049658Rhizomagastrodiae_C368-T04_good_139.650
SRR6049659Rhizomagastrodiae_C368-T04_good_150.590
SRR6049660Rhizomagastrodiae_C368-T01_good_143.630
SRR6049661Rhizomagastrodiae_C368-T04_good_141.410
SRR6049662Rhizomagastrodiae_C368-T01_good_143.530
SRR6049663Rhizomagastrodiae_C368-T01_good_141.640
SRR6049664Rhizomagastrodiae_C368-T10_good_140.770
SRR6049665Rhizomagastrodiae_C368-T10_good_140.770
SRP279888GastroGastrodia elata tuber 31.85
JuvenJuvenile tuber22.62
Mother_GastroMother tuber of Gastrodia elata 21.86
Mother_JuvenMother tuber of Juvenile 20.96