Detail information of GWHGAAEX009259/evm.TU.scaffold_240.13
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|337287462|ref|YP_004626935.1| | 3.00E-10 | phosphoribosylanthranilate isomerase [Thermodesulfatator indicus DSM 15286] |
| KOG | KOG4202 | 5.00E-33 | Phosphoribosylanthranilate isomerase |
| nr | gi|42573275|ref|NP_974734.1| | 6.08E-33 | phosphoribosylanthranilate isomerase 2 [Arabidopsis thaliana] |
| Swissprot | tr|Q42440|PAI1_ARATH | 1.00E-32 | N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic (Precursor) |
| trEMBL | tr|W5HRY4|W5HRY4_WHEAT | 5.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_7BL_F326A04E9.1} (Fragment) |
| TAIR | AT1G29410_1 | 5.00E-33 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000244 | 802782 | 835181 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009259
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00697.21 | PRAI | 218 | 297 | 2.60E-10 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006568 | Biological Process | tryptophan metabolic process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0004640 | Molecular Function | phosphoribosylanthranilate isomerase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.880 |
| SRR2545915 | Juvenile tuber | 20.560 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.700 |
| SRR5643514 | five period of Gastrodia elata | 15.620 | |
| SRR5643515 | five period of Gastrodia elata | 18.860 | |
| SRR5643524 | five period of Gastrodia elata | 17.660 | |
| SRR5643525 | five period of Gastrodia elata | 28.810 | |
| SRR5643528 | five period of Gastrodia elata | 44.250 | |
| SRR5643658 | five period of Gastrodia elata | 31.620 | |
| SRR5643659 | five period of Gastrodia elata | 19.630 | |
| SRR5643660 | five period of Gastrodia elata | 21.520 | |
| SRR5643661 | five period of Gastrodia elata | 20.730 | |
| SRR5643662 | five period of Gastrodia elata | 30.490 | |
| SRR5643663 | five period of Gastrodia elata | 26.540 | |
| SRR5643664 | five period of Gastrodia elata | 21.960 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.160 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 22.350 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.450 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.160 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.800 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.290 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.060 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.750 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.570 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.750 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.700 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.700 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 32.58 |
| Juven | Juvenile tuber | 17.89 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.24 | |
| Mother_Juven | Mother tuber of Juvenile | 25.89 |