Detail information of GWHGAAEX009263/evm.TU.scaffold_241.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743757318|ref|XP_010921469.1|6.90E-51PREDICTED: ethylene-responsive transcription factor ERF073-like [Elaeis guineensis]
Swissprottr|Q9CA27|EF118_ARATH4.00E-25Ethylene-responsive transcription factor ERF118
trEMBLtr|M0SLQ1|M0SLQ1_MUSAM5.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P06840_001}
TAIRAT1G685501.00E-24Integrase-type DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002382347524260+
Transcript Sequence

Network for GWHGAAEX009263

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP2961442.00E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms173.480
SRR2545915Juvenile tuber133.850
SRP108465SRR5643513five period of Gastrodia elata176.810
SRR5643514five period of Gastrodia elata207.620
SRR5643515five period of Gastrodia elata133.510
SRR5643524five period of Gastrodia elata186.320
SRR5643525five period of Gastrodia elata136.030
SRR5643528five period of Gastrodia elata95.030
SRR5643658five period of Gastrodia elata96.100
SRR5643659five period of Gastrodia elata243.760
SRR5643660five period of Gastrodia elata298.010
SRR5643661five period of Gastrodia elata309.170
SRR5643662five period of Gastrodia elata291.970
SRR5643663five period of Gastrodia elata284.240
SRR5643664five period of Gastrodia elata428.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1216.970
SRR6049655Rhizomagastrodiae_C368-T10_good_1300.210
SRR6049656Rhizomagastrodiae_C368-T07_good_1194.480
SRR6049657Rhizomagastrodiae_C368-T07_good_1230.600
SRR6049658Rhizomagastrodiae_C368-T04_good_1186.840
SRR6049659Rhizomagastrodiae_C368-T04_good_1188.770
SRR6049660Rhizomagastrodiae_C368-T01_good_1216.100
SRR6049661Rhizomagastrodiae_C368-T04_good_1187.150
SRR6049662Rhizomagastrodiae_C368-T01_good_1200.510
SRR6049663Rhizomagastrodiae_C368-T01_good_1194.940
SRR6049664Rhizomagastrodiae_C368-T10_good_1150.490
SRR6049665Rhizomagastrodiae_C368-T10_good_1150.490
SRP279888GastroGastrodia elata tuber 210.98
JuvenJuvenile tuber229.37
Mother_GastroMother tuber of Gastrodia elata 103.75
Mother_JuvenMother tuber of Juvenile 176.50