Detail information of GWHGAAEX009267/evm.TU.scaffold_241.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695015153|ref|XP_009394433.1|3.97E-91PREDICTED: LOB domain-containing protein 40 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M886|LBD41_ARATH6.00E-73LOB domain-containing protein 41
trEMBLtr|M0SIW8|M0SIW8_MUSAM2.00E-86Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P29520_001}
TAIRAT3G025502.00E-72LOB domain-containing protein 41

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000238103778105589-
Transcript Sequence

Network for GWHGAAEX009267

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.13LOB1442423.00E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.170
SRR2545915Juvenile tuber410.210
SRP108465SRR5643513five period of Gastrodia elata19.820
SRR5643514five period of Gastrodia elata15.190
SRR5643515five period of Gastrodia elata29.130
SRR5643524five period of Gastrodia elata19.040
SRR5643525five period of Gastrodia elata23.160
SRR5643528five period of Gastrodia elata10.690
SRR5643658five period of Gastrodia elata7.460
SRR5643659five period of Gastrodia elata25.390
SRR5643660five period of Gastrodia elata15.210
SRR5643661five period of Gastrodia elata23.070
SRR5643662five period of Gastrodia elata30.120
SRR5643663five period of Gastrodia elata21.460
SRR5643664five period of Gastrodia elata54.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_162.740
SRR6049655Rhizomagastrodiae_C368-T10_good_158.250
SRR6049656Rhizomagastrodiae_C368-T07_good_138.950
SRR6049657Rhizomagastrodiae_C368-T07_good_127.450
SRR6049658Rhizomagastrodiae_C368-T04_good_133.840
SRR6049659Rhizomagastrodiae_C368-T04_good_130.200
SRR6049660Rhizomagastrodiae_C368-T01_good_152.150
SRR6049661Rhizomagastrodiae_C368-T04_good_144.110
SRR6049662Rhizomagastrodiae_C368-T01_good_173.200
SRR6049663Rhizomagastrodiae_C368-T01_good_1180.420
SRR6049664Rhizomagastrodiae_C368-T10_good_181.550
SRR6049665Rhizomagastrodiae_C368-T10_good_181.550
SRP279888GastroGastrodia elata tuber 76.88
JuvenJuvenile tuber137.98
Mother_GastroMother tuber of Gastrodia elata 958.89
Mother_JuvenMother tuber of Juvenile 565.95