Gene detail

Detail information of GWHGAAEX009280/evm.TU.scaffold_241.23

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695051178\|ref\|XP_009413605.1\|	1.61E-137	PREDICTED: uncharacterized protein LOC103994878 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0TRE6\|M0TRE6_MUSAM	6.00E-138	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P17930_001}
TAIR	AT1G73800	2.00E-103	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000238	338385	342137	+

Transcript Sequence
>GWHTAAEX009280 AAATAATCTAATTTTCATGTATTCCTTTGTACGGACACCTAAAATTCATTCAAAACGCGGAAAGCCATTTCGCATTCTAACTAAAGTCTTCGTTACATATATATACATGTTTAAAGTAGTGAACGATCTTCAAAAGTCTTTTCTAAAACACTTCCTTCGCAGAAGCATCTAGGCAGCTTCTTTTACTGTGTTAATTTCCACAGCTTCAACTCTTATAAAGCCAACATTTTAATGCTCAAGTTTCCCTCAACTCTTCTTCTTTCGAGTTTTTCCCTGTACCATTTTCTTCAGGCAATTAGAGCTCTCTTCTGTATCAGATATGGCGGCCAAGAGGCTCCTTGAGGACGCTCAAACTGTTTCAGCAGAAAAATCTGAGGGCAAAAGGCTGAGGTCCCTGCCATCTTTTACAATGGTTATTAGGGAACCAAACTTCTGCCTTGCACTGGAACCTATTTTACGAAGAGTGGTGCGCGAAGAGATGGAGCACAGGCTTGTTCATCATGCTTGTTCGTTGCAGAGATCATCTCAAATGCCCCTCGAAGAGGTACGAGCTTCTTCCAGTCTGCAACTGTGCTTCAAGAAGCTTCCATCTCTTCCAATATTCACCGAGAAAAGGATTGAAGATGAGGAAGGCTGCCCTTTAGAAATTCTGCTGGTAGACACAGCCACAGGGAAGAAGCCTCGAACACAAATTCCCTCCTCAATCAAAGTGGAGCTAGTTGTTCTGGATGGCGATTTTCCTTACGAAAACTGCAACAACTGGTCCAGTGCTGATTTCAACCGCCATATAGTGAAGGAAAGGAGAGGAAGAAGACCGTTGCTCACTGGAGACATACATATCACCCTCAAGGATGGAGCTGCTTCCATTGATGAGCTCAAATTCACAGATAATTCCAGCTGGATCAGAAGCAGACACTTCAGAATCGGAGTCAGGGTGTTGCCCGAGAGCCAGGAAGTGAATTCGAAAGTTCAAGAGGCGGCGACAAATCGATTCACAGTTAAGGATCACCGCGGAGAATCATATAAGAAGCACTACCCGCCAGCACTTGGTGATGAGGTCTGGCGGCTAGACAAGATTAGTAAGGATGGCGTTTTTCACAGCAGGCTCTCAGCGGAGAACATCACAACTGTGCAGGAATTTTTAAAGCTATCAGTTATTGATTCTGCTCAACTGCGAAAAATACTACAGATGTCTGATCGAAATTGGGAGACCACAATCAATCATGCAAGAACCTGCCCTCTGGGCGAGAAGCTATACATGCACCAAGGCCCTCATTATGCCATTTTTTTGAGTCCTATTTGTGAAGTTATTAAGATTGAATATAATGGATTATCTTGTACATTCCAAGAGTTGAACATACCAACCAAAGTGAATGAGTTAGCGTTGGAAGCTTACAAATGCTGGGATAGTTTAGAAGAAATCAGCCTTCCATTACAAGGTGAACCAATGAATCAAGTTCTAATTGACCCCTCTTATCAGATCGAAAGTTTTGTAGGGTTAGGATTAATACAAAATGATGTGATAGGCCTCAGTAGCTGGTCTCCAGCAATGCAAAATAATTTGTTATGATAAAAAATTAAATCAAAACTAAATTGAAAAGGAGGCGAAAGAAATCTCAGAAGCTACTTTTTGGGAGAAAATTGTGCATAAAGTATCAAAAGGCAGCTAAATCCTAGTAGCAGCCCTAATTGCTTGTTGAAAGAGGAAGCAAACAAGAGGTGGTCAAGCTCTCTTTTTTATATTTTTCCCATTTTTTTGGTGTAATGTGTTTCTTGTAGATAATTTAATTTGTTCAATTGTCATTAGTAATGCATATATTTTCTCTGTAAGATGCATATGAATAAAAGAGTTAACAGTTCACTGTAACCAGCATTTAGATTGTGTTTTTTCTCTTTTTAATATTTTAATGACAATTTTTTAGCTGCTTGAATTGACTGAAAAATGTAAACGGTATGCTTACTGATTTTTTCAAGCAGATCTTTAATTGGAGGTGTTTGCATTTAGTGCAAATACTTTTGAAAGCTTGGTCTCATAAACTTTTTATTATATGATTGAGTACACTGAAAACCCTAAAAATGAGTAAAATGCCATATGAAACCAAAGGTGGCATTACGAATTCCAAATCGCCATCTATTTAATTAATTAACAACCAACCA

Network for GWHGAAEX009280

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07887.10	Calmodulin_bind	82	367	2.70E-112

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005516	Molecular Function	calmodulin binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	41.760
SRP064423	SRR2545915	Juvenile tuber	46.460
SRP108465	SRR5643513	five period of Gastrodia elata	19.430
	SRR5643514	five period of Gastrodia elata	7.230
	SRR5643515	five period of Gastrodia elata	73.370
	SRR5643524	five period of Gastrodia elata	15.310
	SRR5643525	five period of Gastrodia elata	50.740
	SRR5643528	five period of Gastrodia elata	70.720
	SRR5643658	five period of Gastrodia elata	17.800
	SRR5643659	five period of Gastrodia elata	89.580
	SRR5643660	five period of Gastrodia elata	17.890
	SRR5643661	five period of Gastrodia elata	47.180
	SRR5643662	five period of Gastrodia elata	49.640
	SRR5643663	five period of Gastrodia elata	38.230
	SRR5643664	five period of Gastrodia elata	98.590
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.780
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	22.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	23.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.150
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	17.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	53.080
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	22.180
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	17.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	43.420
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.130
SRP279888	Gastro	Gastrodia elata tuber	23.31
	Juven	Juvenile tuber	5.64
	Mother_Gastro	Mother tuber of Gastrodia elata	118.15
	Mother_Juven	Mother tuber of Juvenile	70.56