Detail information of GWHGAAEX009302/evm.TU.scaffold_242.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|511767629|ref|YP_006918225.2|6.00E-06endo- 1,4-beta-mannanase [Simiduia agarivorans SA1 = DSM 21679]
nrgi|743892406|ref|XP_010911540.1|4.49E-26PREDICTED: mannan endo-1,4-beta-mannosidase 1-like [Elaeis guineensis]
Swissprottr|Q6Z310|MAN9_ORYSJ4.00E-24Putative mannan endo-1,4-beta-mannosidase 9 (Precursor)
trEMBLtr|A0A059A074|A0A059A074_EUCGR2.00E-25Uncharacterized protein {ECO:0000313|EMBL:KCW46730.1}
TAIRAT2G206802.00E-20Glycosyl hydrolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002392986631244-
Transcript Sequence

Network for GWHGAAEX009302

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K19355MAN Metabolic pathways map01100
Fructose and mannose metabolismmap00051

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.130
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.130
SRR5643514five period of Gastrodia elata0.850
SRR5643515five period of Gastrodia elata0.870
SRR5643524five period of Gastrodia elata0.550
SRR5643525five period of Gastrodia elata0.200
SRR5643528five period of Gastrodia elata4.660
SRR5643658five period of Gastrodia elata0.360
SRR5643659five period of Gastrodia elata0.110
SRR5643660five period of Gastrodia elata0.060
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.170
SRR6049655Rhizomagastrodiae_C368-T10_good_10.470
SRR6049656Rhizomagastrodiae_C368-T07_good_10.140
SRR6049657Rhizomagastrodiae_C368-T07_good_10.090
SRR6049658Rhizomagastrodiae_C368-T04_good_10.230
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.250
SRR6049661Rhizomagastrodiae_C368-T04_good_10.120
SRR6049662Rhizomagastrodiae_C368-T01_good_10.230
SRR6049663Rhizomagastrodiae_C368-T01_good_10.180
SRR6049664Rhizomagastrodiae_C368-T10_good_10.420
SRR6049665Rhizomagastrodiae_C368-T10_good_10.420
SRP279888GastroGastrodia elata tuber 0.04
JuvenJuvenile tuber1.07
Mother_GastroMother tuber of Gastrodia elata 15.48
Mother_JuvenMother tuber of Juvenile 23.15