Detail information of GWHGAAEX009303/evm.TU.scaffold_242.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|339502273|ref|YP_004689693.1|4.00E-82ABC transporter [Roseobacter litoralis Och 149]
KOGKOG12340ABC (ATP binding cassette) 1 protein
nrgi|743855507|ref|XP_010941455.1|0PREDICTED: aarF domain-containing protein kinase 4 [Elaeis guineensis]
Swissprottr|Q9MA15|Y1796_ARATH5.00E-24Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic (Precursor)
trEMBLtr|A0A067JWL9|A0A067JWL9_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP28361.1}
TAIRAT4G016600ABC transporter 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002393476655555+
Transcript Sequence

Network for GWHGAAEX009303

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03109.15ABC12613766.70E-33
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.850
SRR2545915Juvenile tuber14.870
SRP108465SRR5643513five period of Gastrodia elata10.650
SRR5643514five period of Gastrodia elata9.710
SRR5643515five period of Gastrodia elata10.060
SRR5643524five period of Gastrodia elata10.320
SRR5643525five period of Gastrodia elata14.550
SRR5643528five period of Gastrodia elata22.120
SRR5643658five period of Gastrodia elata12.740
SRR5643659five period of Gastrodia elata12.320
SRR5643660five period of Gastrodia elata13.400
SRR5643661five period of Gastrodia elata12.770
SRR5643662five period of Gastrodia elata14.360
SRR5643663five period of Gastrodia elata14.070
SRR5643664five period of Gastrodia elata15.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.760
SRR6049655Rhizomagastrodiae_C368-T10_good_18.720
SRR6049656Rhizomagastrodiae_C368-T07_good_115.000
SRR6049657Rhizomagastrodiae_C368-T07_good_118.300
SRR6049658Rhizomagastrodiae_C368-T04_good_115.930
SRR6049659Rhizomagastrodiae_C368-T04_good_117.140
SRR6049660Rhizomagastrodiae_C368-T01_good_116.690
SRR6049661Rhizomagastrodiae_C368-T04_good_114.640
SRR6049662Rhizomagastrodiae_C368-T01_good_114.940
SRR6049663Rhizomagastrodiae_C368-T01_good_112.770
SRR6049664Rhizomagastrodiae_C368-T10_good_115.000
SRR6049665Rhizomagastrodiae_C368-T10_good_115.000
SRP279888GastroGastrodia elata tuber 15.70
JuvenJuvenile tuber19.00
Mother_GastroMother tuber of Gastrodia elata 31.78
Mother_JuvenMother tuber of Juvenile 33.98