Gene detail

Detail information of GWHGAAEX009322/evm.TU.scaffold_242.22

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0244	0	Kinesin-like protein
nr	gi\|672115599\|ref\|XP_008780941.1\|	0	PREDICTED: chromosome-associated kinesin KIF4 [Phoenix dactylifera]
Swissprot	tr\|P46869\|FLA10_CHLRE	6.00E-78	Kinesin-like protein FLA10
trEMBL	tr\|M0T172\|M0T172_MUSAM	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT5G60930	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000239	361216	380372	-

Transcript Sequence
>GWHTAAEX009322 ATGGATGTGTCGGAGGAGACCAAATCATCGCAGAAAGAATGCGTGAAGGTTGCCGTCAACATCAGGCCACTGATCCCTACAGAGATCTTTCTGGGATGCAAGGACTGCATCAACGTCGTCCCTGGTGAGCCTCAGGTTCAAATTGGAGCTCATTGCTTTACTTATGATCATGTTTATGGGAGTTCAGCCTCTCCTTCCTCTTGCATATACGAAGAATGTGTAGAGCCTTTAGTTGATGCAGTTTTTCAAGGGTACAATGCAACTGTTCTAGCTTATGGACAGACGGGTTCTGGAAAAACTTATACCATGGGAACCAATTTCACTGGAGAGGGCAATAGCGGGGGGATTATACCGCTAGTAATGGATAGCATATTTAAGAATGCTAATGAAATGAAGAAAGACTCTGAGATTTTGATTAGAGTATCCTTTATTGAGATTTTCAAAGAAGAAGTTTTTGACTTATTAGATCTGCAAGCAAAACCATCTAGACCTCCAATTCAGATTAGAGAAACTGTTGGCGGGGGCATAACTCTTGCTGGTGTTATTGTAGCAGAAGTTCAATCTAAAGAAGAGATGGCCATGTATCTAATGCGTGGATCCCAATCTCGTGCCACAGGAAGCACTAACATGAATAGTCAATCTAGCCGTTCACATGCCATATTTACAATTTCCTTGGAGCAAAAAAGAAGTGTTGATTATTGTAGAGATGGATCTGCTGTCAATGATTATGGTGATGACCTCTTAGTTGCTAAGTTTCATTTGGTTGATCTTGCTGGATCTGAACGTGCAAAACGTACTGGAGCTGATGGATTGCGGTTAAAAGAAGGCATTCACATAAACAAGGGTTTACTAGCTCTTGGTAATGTGATAAGTGCACTTGGTGATGAGAAAAAGAGAAAAGAAGGGGGCCATGTCCCTTATCGAGATAGCAAGTTAACACGTTTGTTGCAGGATTCTCTTGGAGGAAATAGCAAAACTGTTATGATTGCTTGTATTAGCCCTGCTGATGCAAATGCTGAAGAGACAATAAACACTCTGAAATATGCTAATCGAGCAAGAAATATCCAAAATAAGGCAGTGATAAATCGTGATCCTGCATCAATTGAAATGCAAAAATTGCGCAATCAATTAGAGCAACTGCAATCTGAAGTTTTATTTTATCGTGGAAATAATACACCTCTTGAGGAACTACAGGTTCTTCATAGAAGAATCATATTGCTCGAGTCAAGCAATGCTGAACTCCATCAAGAGTTAAAAGAACGAGAAATCACGTGCGATCAACTATCAAAGCAAGCTTTGAATGCCCAAGTTGAAAAAGATAAGTTAATTGAGAAGATTGAAGCAGCACGTGCTGGAAAGCCATGGGAAGAGATTGATTATATGGAAAACACTGCGAAGGTAGACCTGTTGACTGGATATGTGTCAAGGATTCAAGAGCTAGAAAAAGAGTTGGTGCGAGCTCAAAAGTCATACCACCCTAGTCAAAGTGATTTCATTGATTGCCTCACTTTAGAAAAAGATCCTTATTTGCCAAATCTTCAGGATTTAGCATGTGTTTCTGATGGAGGGGCAATAGATGATTCCAGTGAAGTTGAAGATGATGAAAAAGAAAGGGAACATTCCTCCCTGCAAGATAGATTGGACAAGGAGCTTAAGGAATTGGATAAAAGGCTGGAACAGAAGGAGGCCGAAATGAAAAGATTTTCCAAGGTGGATACATCTGTACTCAGGCATCATTATGAGAGGAAATTGATGGAACTAGAACAAGAGAAAAAGGCTTTACAGAAAGAGATAGAGGAACTCCGCCTAAACCTTGCAAATATATCTTCCACTTCTGGTGATTGTGCACAAAAACTGAAAGATGAATATCTTCATAAATTGACTATGCTTGAATCACAGGTGTCTGAATTGAAAAAAAAGCAAGAGGCACAATCTCAATTATTAAGGCAAAAACAAAAAAGTGATGATGCTGCAAAACGGCTTCAGGAAGAAATTCACAAAATAAAGTCTCAGAAGGTACAATTACAACAAAAGATAAAACATGAATCTGAGCAGTTTCGATCTTGGAAGGCTACTCGAGAGAAGGAAGTAATGCAGCTTAAGAAGGAGGGGCGGAGGAACGAGTATGAAATGCACAAGCTGTTGGCTTTGAATCAACGGCAGAAGATGGTTTTGCAGCGAAAGACTGAAGAGGCTTCCATGGCTACAAAAAGATTGAAAGATTTTCTTGAAGCGAAGAAAATTTACCCTCGTAACGGACAAGCCAATAATCCTGGAATTCAGGCTTTATTGCAGGCCATAGAAGATGAACTTGAAGTGTCTGTTAGGGTACACGAGGTTCGTTCAGAATATGAACGCCAGGCGGAAGGAAGAGCTGCAATGGCAAGGGAGCTTGCCAAACTAAAAGAGGAATCCGAAATTGCGAGACAAAAGATTATGTGTGAGAGTCCTCTCCAAGCAATTTCTCCGAGCGCTAGAAATTCGAGGATTGCAGCGTTGGAAAACATGCTAGCCACTTCATCCAGCACCCTCGTTTTCATGGCGTCGGAGCTGTCGGAAGCGGAGGAGCGCGAGCGTGTATTCAGTGGCAGGGGAAGATGGAATCAGATTCACTCACTCATCGATGCAAAGAATCTGATGAACCGCCTCTTCAATTTGGCGGCCTCTTACAGGTGCCAGCTATGGGATAAGGAATTGGGGTGCAGAGAGAAAGATGCAGAGATCAGCGAGTTGAAGGAGAACATATACAGGCTGAGCAGCTTGGCCAGACAGCTGGATTCGAAGCAGAAAACTCCGTTAAATGAGGGAACGAAGGCTAATCCTCGAAAGCCTGTCGCGATGGCTTTGAGGGACGCGAGGGAGGGCGTGGAATCGGAGGCTGATATGGATACGTCGTCAGATTCGGAAGAAGAGGGGGACAAGGAGTCCGACGAAGATTGGGTGGAGTCCAGGAAGGCCAAAACGAAGAGGAGATCCAGGTCAAAGATGTTCTCAGATGATTACGCCGCCGCCGCCGCCGCCGCCGCTGCCGCTGCCGCTGATCAGCACAAAGTCTGCTGCTCCTGCTCCAAAAAATCCTCCTGCAAGACTGTAAAATGTGAGTGCCGAGCAGCCGGCAAATCATGCGGCATTTGCTGCGGCTGCATATCTCTAAAGTGTGCTAACAGGGAAGAGGGGGAGGAGGAGGAGGAGGAGCGTCGTCTGGATTCAGATATGGAGATGGATGACGAGAAGCTGATATCTCAAGGCACGCTGCTGCTTCAGAGTGCCCTCAAGGCACGCAGACCCTTGTCGGACATTGGAAACAAGCAGGAAAAGGCGAAGCGAGAAAAACCGGCAAAGAAGAAGCAGTGGCGAAAACTGACCATTCAACTCGTGCCTTCAGAAATTGAAGGCGAGGGGACGGGTGCGGCAGTGACGCCGCAGCCGCCGGCGCAGCAGCTGCGACGGCCTCAAGCAGCGGAAGCCATTTCTTTGGAGATCCACCACCCGCCTTTCGGGGACAGCAACGCTGTCAGAAATGATGAATCAGCATTGAGGGGTAAAGAGAATAGTAGTAACAGAGCTGCGCTTGCCAATAGCAGCAGATTCAAGAGCACTGCGCCGTCGGATGACAAGGAAAATAAAATGCTATGA

Network for GWHGAAEX009322

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	45	355	9.90E-104

Protein Sequence

>GWHPAAEX009322
MDVSEETKSSQKECVKVAVNIRPLIPTEIFLGCKDCINVVPGEPQVQIGAHCFTYDHVYGSSASPSSCIYEECVEPLVDAVFQGYNATVLAYGQTGSGKTYTMGTNFTGEGNSGGIIPLVMDSIFKNANEMKKDSEILIRVSFIEIFKEEVFDLLDLQAKPSRPPIQIRETVGGGITLAGVIVAEVQSKEEMAMYLMRGSQSRATGSTNMNSQSSRSHAIFTISLEQKRSVDYCRDGSAVNDYGDDLLVAKFHLVDLAGSERAKRTGADGLRLKEGIHINKGLLALGNVISALGDEKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADANAEETINTLKYANRARNIQNKAVINRDPASIEMQKLRNQLEQLQSEVLFYRGNNTPLEELQVLHRRIILLESSNAELHQELKEREITCDQLSKQALNAQVEKDKLIEKIEAARAGKPWEEIDYMENTAKVDLLTGYVSRIQELEKELVRAQKSYHPSQSDFIDCLTLEKDPYLPNLQDLACVSDGGAIDDSSEVEDDEKEREHSSLQDRLDKELKELDKRLEQKEAEMKRFSKVDTSVLRHHYERKLMELEQEKKALQKEIEELRLNLANISSTSGDCAQKLKDEYLHKLTMLESQVSELKKKQEAQSQLLRQKQKSDDAAKRLQEEIHKIKSQKVQLQQKIKHESEQFRSWKATREKEVMQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASMATKRLKDFLEAKKIYPRNGQANNPGIQALLQAIEDELEVSVRVHEVRSEYERQAEGRAAMARELAKLKEESEIARQKIMCESPLQAISPSARNSRIAALENMLATSSSTLVFMASELSEAEERERVFSGRGRWNQIHSLIDAKNLMNRLFNLAASYRCQLWDKELGCREKDAEISELKENIYRLSSLARQLDSKQKTPLNEGTKANPRKPVAMALRDAREGVESEADMDTSSDSEEEGDKESDEDWVESRKAKTKRRSRSKMFSDDYAAAAAAAAAAAADQHKVCCSCSKKSSCKTVKCECRAAGKSCGICCGCISLKCANREEGEEEEEERRLDSDMEMDDEKLISQGTLLLQSALKARRPLSDIGNKQEKAKREKPAKKKQWRKLTIQLVPSEIEGEGTGAAVTPQPPAQQLRRPQAAEAISLEIHHPPFGDSNAVRNDESALRGKENSSNRAALANSSRFKSTAPSDDKENKML

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.980
SRP064423	SRR2545915	Juvenile tuber	2.090
SRP108465	SRR5643513	five period of Gastrodia elata	8.450
	SRR5643514	five period of Gastrodia elata	11.470
	SRR5643515	five period of Gastrodia elata	9.510
	SRR5643524	five period of Gastrodia elata	9.820
	SRR5643525	five period of Gastrodia elata	1.960
	SRR5643528	five period of Gastrodia elata	1.220
	SRR5643658	five period of Gastrodia elata	2.360
	SRR5643659	five period of Gastrodia elata	3.410
	SRR5643660	five period of Gastrodia elata	3.650
	SRR5643661	five period of Gastrodia elata	3.320
	SRR5643662	five period of Gastrodia elata	2.510
	SRR5643663	five period of Gastrodia elata	3.180
	SRR5643664	five period of Gastrodia elata	2.830
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.910
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.390
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.540
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.350
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.080
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.900
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.710
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.750
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.750
SRP279888	Gastro	Gastrodia elata tuber	3.14
	Juven	Juvenile tuber	5.33
	Mother_Gastro	Mother tuber of Gastrodia elata	4.93
	Mother_Juven	Mother tuber of Juvenile	5.40