Detail information of GWHGAAEX009324/evm.TU.scaffold_242.25
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|325108064|ref|YP_004269132.1| | 9.00E-25 | serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305] |
| KOG | KOG1187 | 2.00E-146 | Serine/threonine protein kinase |
| nr | gi|743766580|ref|XP_010913531.1| | 1.10E-180 | PREDICTED: serine/threonine-protein kinase PBS1 [Elaeis guineensis] |
| Swissprot | tr|Q0WRY5|CDL1_ARATH | 3.00E-81 | Serine/threonine-protein kinase CDL1 {ECO:0000305} |
| trEMBL | tr|A5BJE0|A5BJE0_VITVI | 4.00E-170 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN76955.1} |
| TAIR | AT1G24030 | 2.00E-146 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000239 | 499729 | 523688 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009324
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 145 | 419 | 1.10E-47 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIb |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.720 |
| SRR2545915 | Juvenile tuber | 26.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.500 |
| SRR5643514 | five period of Gastrodia elata | 19.450 | |
| SRR5643515 | five period of Gastrodia elata | 15.760 | |
| SRR5643524 | five period of Gastrodia elata | 14.860 | |
| SRR5643525 | five period of Gastrodia elata | 20.210 | |
| SRR5643528 | five period of Gastrodia elata | 19.700 | |
| SRR5643658 | five period of Gastrodia elata | 29.530 | |
| SRR5643659 | five period of Gastrodia elata | 14.140 | |
| SRR5643660 | five period of Gastrodia elata | 19.050 | |
| SRR5643661 | five period of Gastrodia elata | 14.800 | |
| SRR5643662 | five period of Gastrodia elata | 24.510 | |
| SRR5643663 | five period of Gastrodia elata | 22.380 | |
| SRR5643664 | five period of Gastrodia elata | 22.210 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.370 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 11.610 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.750 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.960 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.870 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 10.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.130 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 12.810 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.970 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.260 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.260 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 23.59 |
| Juven | Juvenile tuber | 15.44 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.76 | |
| Mother_Juven | Mother tuber of Juvenile | 15.98 |