Detail information of GWHGAAEX009329/evm.TU.scaffold_242.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21970Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins
nrgi|700254076|gb|AIU48659.1|0RabGAP/TBC domain-containing protein, partial [Iris japonica]
trEMBLtr|A0A097PKX5|A0A097PKX5_9ASPA0RabGAP/TBC domain-containing protein {ECO:0000313|EMBL:AIU48659.1} (Fragment)
TAIRAT5G525900Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000239733466821284-
Transcript Sequence

Network for GWHGAAEX009329

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12068.7DUF35481001948.00E-23
PF00566.17RabGAP-TBC3756031.00E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20168TBC1D15 Mitophagy - animal map04137

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms77.320
SRR2545915Juvenile tuber54.580
SRP108465SRR5643513five period of Gastrodia elata41.650
SRR5643514five period of Gastrodia elata41.140
SRR5643515five period of Gastrodia elata41.480
SRR5643524five period of Gastrodia elata42.770
SRR5643525five period of Gastrodia elata55.780
SRR5643528five period of Gastrodia elata51.090
SRR5643658five period of Gastrodia elata43.210
SRR5643659five period of Gastrodia elata29.540
SRR5643660five period of Gastrodia elata30.600
SRR5643661five period of Gastrodia elata26.690
SRR5643662five period of Gastrodia elata24.690
SRR5643663five period of Gastrodia elata27.230
SRR5643664five period of Gastrodia elata25.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.750
SRR6049655Rhizomagastrodiae_C368-T10_good_142.390
SRR6049656Rhizomagastrodiae_C368-T07_good_141.260
SRR6049657Rhizomagastrodiae_C368-T07_good_157.920
SRR6049658Rhizomagastrodiae_C368-T04_good_154.350
SRR6049659Rhizomagastrodiae_C368-T04_good_168.790
SRR6049660Rhizomagastrodiae_C368-T01_good_151.710
SRR6049661Rhizomagastrodiae_C368-T04_good_151.800
SRR6049662Rhizomagastrodiae_C368-T01_good_141.290
SRR6049663Rhizomagastrodiae_C368-T01_good_147.070
SRR6049664Rhizomagastrodiae_C368-T10_good_145.990
SRR6049665Rhizomagastrodiae_C368-T10_good_145.990
SRP279888GastroGastrodia elata tuber 31.72
JuvenJuvenile tuber45.67
Mother_GastroMother tuber of Gastrodia elata 47.78
Mother_JuvenMother tuber of Juvenile 44.88