Detail information of GWHGAAEX009331/CADD00736.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00112.00E-10Nucleotide excision repair factor NEF2, RAD23 component
nrgi|565484692|ref|XP_006299986.1|1.35E-09hypothetical protein CARUB_v10016200mg [Capsella rubella]
Swissprottr|Q84L30|RD23D_ARATH6.00E-11Ubiquitin receptor RAD23d
trEMBLtr|W5GQ21|W5GQ21_WHEAT1.00E-11Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_6BS_3B5698FF2.1}
TAIRAT5G384702.00E-10Rad23 UV excision repair protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000264505153505791+
Transcript Sequence

Network for GWHGAAEX009331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00627.30UBA63841.60E-06
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10839RAD23, HR23 Protein processing in endoplasmic reticulum map04141
Nucleotide excision repairmap03420

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.270
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.650
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.260
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00