Detail information of GWHGAAEX009341/evm.TU.scaffold_244.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|88604358|ref|YP_504536.1|2.00E-28peptidase C1A, papain [Methanospirillum hungatei JF-1]
KOGKOG15433.00E-155Cysteine proteinase Cathepsin L
nrgi|148927382|gb|ABR19827.1|0cysteine proteinase [Elaeis guineensis]
Swissprottr|P25776|ORYA_ORYSJ0Oryzain alpha chain (Precursor)
trEMBLtr|A6N8F8|A6N8F8_ELAGV0Cysteine proteinase {ECO:0000313|EMBL:ABR19827.1}
TAIRAT5G43060_13.00E-155Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000237531820534255+
Transcript Sequence

Network for GWHGAAEX009341

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08246.11Inhibitor_I29571161.90E-14
PF00112.22Peptidase_C11443586.00E-86
PF00396.17Granulin3934405.70E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.460
SRR2545915Juvenile tuber3.970
SRP108465SRR5643513five period of Gastrodia elata6.160
SRR5643514five period of Gastrodia elata10.000
SRR5643515five period of Gastrodia elata9.660
SRR5643524five period of Gastrodia elata11.200
SRR5643525five period of Gastrodia elata7.690
SRR5643528five period of Gastrodia elata4.190
SRR5643658five period of Gastrodia elata8.030
SRR5643659five period of Gastrodia elata0.880
SRR5643660five period of Gastrodia elata0.800
SRR5643661five period of Gastrodia elata1.320
SRR5643662five period of Gastrodia elata1.860
SRR5643663five period of Gastrodia elata1.780
SRR5643664five period of Gastrodia elata1.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.370
SRR6049655Rhizomagastrodiae_C368-T10_good_114.110
SRR6049656Rhizomagastrodiae_C368-T07_good_119.120
SRR6049657Rhizomagastrodiae_C368-T07_good_16.620
SRR6049658Rhizomagastrodiae_C368-T04_good_14.520
SRR6049659Rhizomagastrodiae_C368-T04_good_16.180
SRR6049660Rhizomagastrodiae_C368-T01_good_110.840
SRR6049661Rhizomagastrodiae_C368-T04_good_115.020
SRR6049662Rhizomagastrodiae_C368-T01_good_116.130
SRR6049663Rhizomagastrodiae_C368-T01_good_113.310
SRR6049664Rhizomagastrodiae_C368-T10_good_125.680
SRR6049665Rhizomagastrodiae_C368-T10_good_125.680
SRP279888GastroGastrodia elata tuber 0.87
JuvenJuvenile tuber0.77
Mother_GastroMother tuber of Gastrodia elata 6.60
Mother_JuvenMother tuber of Juvenile 3.03