Detail information of GWHGAAEX009354/evm.TU.scaffold_245.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29465.00E-133Uncharacterized conserved protein
nrgi|729372441|ref|XP_010548621.1|4.62E-136PREDICTED: protein YIPF6 homolog [Tarenaya hassleriana]
trEMBLtr|R0HZX4|R0HZX4_9BRAS4.00E-135Protein YIPF {ECO:0000256|RuleBase:RU361264}
TAIRAT2G188405.00E-133Integral membrane Yip1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000248293370303261+
Transcript Sequence

Network for GWHGAAEX009354

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04893.16Yip11332641.10E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.330
SRR2545915Juvenile tuber20.600
SRP108465SRR5643513five period of Gastrodia elata46.830
SRR5643514five period of Gastrodia elata46.100
SRR5643515five period of Gastrodia elata43.920
SRR5643524five period of Gastrodia elata41.300
SRR5643525five period of Gastrodia elata39.810
SRR5643528five period of Gastrodia elata33.670
SRR5643658five period of Gastrodia elata39.280
SRR5643659five period of Gastrodia elata46.260
SRR5643660five period of Gastrodia elata46.050
SRR5643661five period of Gastrodia elata53.300
SRR5643662five period of Gastrodia elata38.810
SRR5643663five period of Gastrodia elata38.090
SRR5643664five period of Gastrodia elata38.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.180
SRR6049655Rhizomagastrodiae_C368-T10_good_193.360
SRR6049656Rhizomagastrodiae_C368-T07_good_164.930
SRR6049657Rhizomagastrodiae_C368-T07_good_156.340
SRR6049658Rhizomagastrodiae_C368-T04_good_156.240
SRR6049659Rhizomagastrodiae_C368-T04_good_161.560
SRR6049660Rhizomagastrodiae_C368-T01_good_162.770
SRR6049661Rhizomagastrodiae_C368-T04_good_157.900
SRR6049662Rhizomagastrodiae_C368-T01_good_171.540
SRR6049663Rhizomagastrodiae_C368-T01_good_162.490
SRR6049664Rhizomagastrodiae_C368-T10_good_174.320
SRR6049665Rhizomagastrodiae_C368-T10_good_174.320
SRP279888GastroGastrodia elata tuber 51.53
JuvenJuvenile tuber58.83
Mother_GastroMother tuber of Gastrodia elata 42.25
Mother_JuvenMother tuber of Juvenile 46.86