Detail information of GWHGAAEX009356/evm.TU.scaffold_245.9
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|186686706|ref|YP_001869900.1| | 3.00E-23 | glycoside hydrolase family protein [Nostoc punctiforme PCC 73102] |
| nr | gi|743763670|ref|XP_010912029.1| | 1.07E-157 | PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q93XX5|Y5713_ARATH | 3.00E-114 | PI-PLC X domain-containing protein At5g67130 (Precursor) |
| trEMBL | tr|M0T8G3|M0T8G3_MUSAM | 1.00E-146 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P19650_001} |
| TAIR | AT1G49740 | 9.00E-128 | PLC-like phosphodiesterases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000248 | 309358 | 312844 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009356
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006629 | Biological Process | lipid metabolic process |
| GO:0008081 | Molecular Function | phosphoric diester hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.510 |
| SRR2545915 | Juvenile tuber | 9.730 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.800 |
| SRR5643514 | five period of Gastrodia elata | 8.540 | |
| SRR5643515 | five period of Gastrodia elata | 17.170 | |
| SRR5643524 | five period of Gastrodia elata | 12.790 | |
| SRR5643525 | five period of Gastrodia elata | 13.170 | |
| SRR5643528 | five period of Gastrodia elata | 21.120 | |
| SRR5643658 | five period of Gastrodia elata | 14.330 | |
| SRR5643659 | five period of Gastrodia elata | 13.920 | |
| SRR5643660 | five period of Gastrodia elata | 10.400 | |
| SRR5643661 | five period of Gastrodia elata | 16.760 | |
| SRR5643662 | five period of Gastrodia elata | 14.020 | |
| SRR5643663 | five period of Gastrodia elata | 13.800 | |
| SRR5643664 | five period of Gastrodia elata | 15.630 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.800 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.790 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 14.300 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.950 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.020 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.820 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.360 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.070 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.630 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.640 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.640 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.94 |
| Juven | Juvenile tuber | 6.37 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 77.54 | |
| Mother_Juven | Mother tuber of Juvenile | 42.39 |