Gene detail

Detail information of GWHGAAEX009360/evm.TU.scaffold_245.13

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0522	Ankyrin repeat protein
nr	gi\|672113289\|ref\|XP_008810256.1\|	PREDICTED: uncharacterized protein LOC103721720 [Phoenix dactylifera]
trEMBL	tr\|M0RQ18\|M0RQ18_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P06880_001}
TAIR	AT3G04470	Ankyrin repeat family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000248	375602	390406	-

Transcript Sequence
>GWHTAAEX009360 AACAAAACTCGTGGAAAAAAAAACTAGTGGATTATTAAATTTTTCGGCCGCTCCGCCTGTTCATTTTTCATGCCTATATTTGCCGCAGGTAATAACTGTAGGTCGCTTCGCCGGTCATGGAGTTTATAGATCTTTGCAATCTAATGCTTCATTTTCACCGACTGAGTCCTTCTGTTGGGCTTCAATTCTCTGACGGTTCTCTGTCATCATAAGCTTTTTGGATACTTGTTTTTTTACTGAGATCCAGCTGTTTCCGTCACTTTGTTAAGCCATCGGCTTTGACTGATGTTGAGTACTTGCAGAAAGAATTGTGAGTTTTTCCAGATCTATTTTCGTGCTCGAGTCTCTTGATGATGGCGATTACTGATTCGTTTTCTTAACAAAAGTCGTGTGCTCTTTGATTTTATTTCCCTTCCTTTTTTTCCTTTTCTTTAAAATTTCAACAAAAAACATCGGATTGGGTCACTGTGAACTTGCAAACTCGTTAGAAAACCCTAAAGAGGGTAGTGCGACTGCGATGTTGGCATATGATATTTGCTGGAGTAAAATCAATTTGTCTTCACCTTTTTTCTAGTTTTTTTTTTGGTAGAGTTAGCTGCCTAGGAGCTGAGGGAAAGCCACGGGAGTAGATATAAGATGGGAGGAGGCAAGGCTGAAACTGCTGATTCACAAAAGGCCCCGTTGGAAGACCTTTCTAAATATTCCCACAGTCCTGCTCATCTTGCCGTTGCTCGCCGAGATCATGTCTCCCTCCGCCGACTTATTGCTGCCCTTCCTCGCCTCCCCAGAGCAGGAGAGATTAATACAGAGGAGGAATCCGTTTCTGCGGAGCTAGCAGCTGATGCCGTCTCATCCATCGTTGATCGTAGGGATGTTCCACACCGTGAAACCCCGCTCCACCTTGCTGTCAGGCTTCGTGACCCCATATCTGCTGAGATTCTCATGTCTGCTGGCGCCGACTGGTCCCTTCAGAATGACCAAGGATGGTCTGCTCTCCAGGAAGCTGTGTGCACCCGAGAAGACATCATTGCTATGATCATTGCTAGACACTACCAACCCTTGGCTTGGGCTAAGTGGTGCCGCCGCCTCCCCAGAATCATCTCATCTATTGGTCGAATCCGCGATTTTTACATGGAGATTACATTCCATTTTGAAAGTTCGGTGATTCCTTTCGTTGGCCGGATTGCCCCATCTGACACTTATCGAATATGGAAGCAGGGATCAAACCTTAGGGCTGACATGACTCTTGCTGGTTTTGATGGTTTCAAAATCCAACGTTCGGATCAAACCTTTCTTTTTTTAGGTGACGGTGCTTCAGGGGGACGCAATCCTTCATTGCCACCTGGCTCATTGATTGTACTTGCTCATAAGGAGAAGGAGATAACCAATGCTCTTGAGGGAGCTGGCAACAGGCCCACAGAAGCCGAGGTAGCTCACGAGGTTGCATTGATGTCCCAAACTAATATGTACCGACCCGGAATTGATGTCACCCAGGCAGAGCTTGTCTCTCATTTAAACTGGAGGCGGCAAGAGAGGACAGAAATGGTGGGAAACTGGAAAGCAAAAGTGTATGACATGCTTCATGTTATGGTAAGTGTTAAGTCAAGAAGAGTTCCTGGTGCAATGACTGATGAAGAACTATTTTCCGCTGATAACGACGAACGAATAGCTAATAATAATGATGAGTTAGATGATATATTGACAGCTGAGGAAAGGATACAACTAGATTCAGCTCTTCAAAATGGTTCAGAGGGGTTTGATGAGGATGAAATAAGTGCGAGTTCTGAACATGCAGATAATACTGGCCCTTCAAAGGAGAGAAAGAGCTGGTTTGGTTGGAACAACAAGAAGGCATCCAAAAACAATGCTGGTGAGGATGCTGATGAATCAAGGGTGCCGAAGAGATTGTTAAAAACAGTTCAGGAGAATGGTACCCATAAACCGGAGTCATTAAGGGAGGAGTTAGGGGACATCAAAAATGGTAAAGAAAAGTACAATTCTAAGAAGAAAAAGATTGGAGCTGTAAGTGAGCCTAATAAGCATGAAAGTGAGTACAAGAAGGGGTTGCGACCAGTTTTGTGGTTGACACCAGACTTCCCATTGCAGACAGATGAGCTTCTGCCGTTGCTTGATGTTTTGGCAGACAAAGTGAAAGCTGTTAGGAGGCTCAGGGAGCTTTTGACGACCAAGCTCCCACAAGGGACATTTCCAGTAAAGGTGGCAGTCCCGATCGTGCCCACAATTCGAGTTGTTATCACATTCACAAAGTTTGAGGAGTTGAGCCCTCCGTCGGATGAGTTTGCGACGCCACTTTCTAGCCCAACTCATCTGCAGGACTACAAAGCTAAGACTACCGAGGCATCGGGTTCATGGTACTCGTGGGTGAGGGGTGGTAGGGGCGGTAGGGGCGGCAGCACATTATTGGGTGATGAGAGTGAGAGCAGAAGCTGGAGGGATGAGATTGACCCTTTCGGGATACCGTCTGACTACATCTGGGTGGACGCCGGCGAGAAGAAGAGGCGGATGAAAGCCAAGAAGGTCAGAAGCAGGAGAGTTTCGAGCAAGAAGAATGCATCTAGAAGTGGAGGAGATGGCCACCAAATCGATGATTTTGAAGATTAGTTGACCCAACAGCTCACTACCTTTTATTTATGTTTTTACATCAGTTTGTATGTGTTGTATGATTCAGGTTAACAGGGTTTGTATGAATGCAGCAGTATTCTGCTTTAAAAGAAAAGCTGGTGATTGATTGATTAAAAAGCGATCAATGTTATTTTGTTTGAAGTTAGTATTAATTGAGTTTGCATTTTAGCCGCTTTCTATTTCACCTTCTATGCTTAATGATTTTGAATCAACTCTTTTTTTAGGTATGCTTTTGATGAAGTTTTTTTTTTCTCTGTTTATGATTAATGTAATGCTCATTATGCC

Network for GWHGAAEX009360

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11904.7	GPCR_chapero_1	199	618	4.90E-99

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	51.890
SRP064423	SRR2545915	Juvenile tuber	35.860
SRP108465	SRR5643513	five period of Gastrodia elata	33.800
	SRR5643514	five period of Gastrodia elata	32.840
	SRR5643515	five period of Gastrodia elata	36.930
	SRR5643524	five period of Gastrodia elata	33.330
	SRR5643525	five period of Gastrodia elata	37.460
	SRR5643528	five period of Gastrodia elata	45.120
	SRR5643658	five period of Gastrodia elata	32.010
	SRR5643659	five period of Gastrodia elata	41.370
	SRR5643660	five period of Gastrodia elata	38.740
	SRR5643661	five period of Gastrodia elata	38.170
	SRR5643662	five period of Gastrodia elata	46.920
	SRR5643663	five period of Gastrodia elata	40.610
	SRR5643664	five period of Gastrodia elata	39.370
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	33.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	29.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.950
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	36.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	38.870
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	41.860
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	36.710
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	36.480
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	31.710
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	34.880
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	30.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	30.400
SRP279888	Gastro	Gastrodia elata tuber	32.36
	Juven	Juvenile tuber	45.65
	Mother_Gastro	Mother tuber of Gastrodia elata	30.29
	Mother_Juven	Mother tuber of Juvenile	26.57