Detail information of GWHGAAEX009368/evm.TU.scaffold_245.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672109974|ref|XP_008792924.1|0PREDICTED: protein ESKIMO 1-like [Phoenix dactylifera]
Swissprottr|Q9LY46|TBL29_ARATH0Protein ESKIMO 1
trEMBLtr|M0TSB7|M0TSB7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P21140_001}
TAIRAT3G559900Plant protein of unknown function (DUF828)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000248593296595511+
Transcript Sequence

Network for GWHGAAEX009368

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14416.5PMR5N1101625.60E-20
PF13839.5PC-Esterase1644531.50E-94
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.960
SRR2545915Juvenile tuber0.650
SRP108465SRR5643513five period of Gastrodia elata1.320
SRR5643514five period of Gastrodia elata1.620
SRR5643515five period of Gastrodia elata2.290
SRR5643524five period of Gastrodia elata1.890
SRR5643525five period of Gastrodia elata76.750
SRR5643528five period of Gastrodia elata49.990
SRR5643658five period of Gastrodia elata220.700
SRR5643659five period of Gastrodia elata4.220
SRR5643660five period of Gastrodia elata1.870
SRR5643661five period of Gastrodia elata2.230
SRR5643662five period of Gastrodia elata5.560
SRR5643663five period of Gastrodia elata6.180
SRR5643664five period of Gastrodia elata4.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.310
SRR6049655Rhizomagastrodiae_C368-T10_good_11.440
SRR6049656Rhizomagastrodiae_C368-T07_good_10.520
SRR6049657Rhizomagastrodiae_C368-T07_good_11.260
SRR6049658Rhizomagastrodiae_C368-T04_good_11.010
SRR6049659Rhizomagastrodiae_C368-T04_good_10.780
SRR6049660Rhizomagastrodiae_C368-T01_good_10.790
SRR6049661Rhizomagastrodiae_C368-T04_good_11.080
SRR6049662Rhizomagastrodiae_C368-T01_good_11.750
SRR6049663Rhizomagastrodiae_C368-T01_good_10.680
SRR6049664Rhizomagastrodiae_C368-T10_good_11.210
SRR6049665Rhizomagastrodiae_C368-T10_good_11.210
SRP279888GastroGastrodia elata tuber 2.61
JuvenJuvenile tuber0.87
Mother_GastroMother tuber of Gastrodia elata 2.33
Mother_JuvenMother tuber of Juvenile 2.16