Detail information of GWHGAAEX009372/evm.TU.scaffold_245.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743790652|ref|XP_010923225.1|8.07E-129PREDICTED: uncharacterized protein LOC105046357 [Elaeis guineensis]
trEMBLtr|W1NEX2|W1NEX2_AMBTC5.00E-112Uncharacterized protein {ECO:0000313|EMBL:ERM94006.1}
TAIRAT5G114701.00E-45bromo-adjacent homology (BAH) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000248639879692118+
Transcript Sequence

Network for GWHGAAEX009372

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01426.17BAH461556.40E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding
GO:0003682Molecular Functionchromatin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.590
SRR2545915Juvenile tuber35.360
SRP108465SRR5643513five period of Gastrodia elata18.110
SRR5643514five period of Gastrodia elata15.600
SRR5643515five period of Gastrodia elata16.170
SRR5643524five period of Gastrodia elata15.350
SRR5643525five period of Gastrodia elata16.340
SRR5643528five period of Gastrodia elata13.810
SRR5643658five period of Gastrodia elata19.740
SRR5643659five period of Gastrodia elata23.150
SRR5643660five period of Gastrodia elata26.950
SRR5643661five period of Gastrodia elata20.090
SRR5643662five period of Gastrodia elata24.950
SRR5643663five period of Gastrodia elata25.410
SRR5643664five period of Gastrodia elata26.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.980
SRR6049655Rhizomagastrodiae_C368-T10_good_121.870
SRR6049656Rhizomagastrodiae_C368-T07_good_123.770
SRR6049657Rhizomagastrodiae_C368-T07_good_135.430
SRR6049658Rhizomagastrodiae_C368-T04_good_129.880
SRR6049659Rhizomagastrodiae_C368-T04_good_138.510
SRR6049660Rhizomagastrodiae_C368-T01_good_130.060
SRR6049661Rhizomagastrodiae_C368-T04_good_129.240
SRR6049662Rhizomagastrodiae_C368-T01_good_121.970
SRR6049663Rhizomagastrodiae_C368-T01_good_123.820
SRR6049664Rhizomagastrodiae_C368-T10_good_120.780
SRR6049665Rhizomagastrodiae_C368-T10_good_120.780
SRP279888GastroGastrodia elata tuber 19.08
JuvenJuvenile tuber33.59
Mother_GastroMother tuber of Gastrodia elata 13.09
Mother_JuvenMother tuber of Juvenile 30.12