Detail information of GWHGAAEX009387/evm.TU.scaffold_246.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16031.00E-36Copper chaperone
nrgi|672138153|ref|XP_008792824.1|4.11E-48PREDICTED: AT-rich interactive domain-containing protein 1B-like [Phoenix dactylifera]
Swissprottr|Q94BT9|ATOX1_ARATH8.00E-14Copper transport protein ATX1
trEMBLtr|M0S2B6|M0S2B6_MUSAM6.00E-61Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P23080_001}
TAIRAT1G230001.00E-36Heavy metal transport/detoxification superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000242342466344230-
Transcript Sequence

Network for GWHGAAEX009387

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA17735.40E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.000
SRR2545915Juvenile tuber11.830
SRP108465SRR5643513five period of Gastrodia elata2.300
SRR5643514five period of Gastrodia elata12.650
SRR5643515five period of Gastrodia elata3.300
SRR5643524five period of Gastrodia elata6.540
SRR5643525five period of Gastrodia elata2.120
SRR5643528five period of Gastrodia elata1.700
SRR5643658five period of Gastrodia elata11.160
SRR5643659five period of Gastrodia elata11.030
SRR5643660five period of Gastrodia elata5.100
SRR5643661five period of Gastrodia elata4.450
SRR5643662five period of Gastrodia elata11.360
SRR5643663five period of Gastrodia elata42.520
SRR5643664five period of Gastrodia elata19.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.610
SRR6049655Rhizomagastrodiae_C368-T10_good_17.700
SRR6049656Rhizomagastrodiae_C368-T07_good_13.980
SRR6049657Rhizomagastrodiae_C368-T07_good_16.450
SRR6049658Rhizomagastrodiae_C368-T04_good_13.780
SRR6049659Rhizomagastrodiae_C368-T04_good_12.230
SRR6049660Rhizomagastrodiae_C368-T01_good_12.150
SRR6049661Rhizomagastrodiae_C368-T04_good_13.200
SRR6049662Rhizomagastrodiae_C368-T01_good_16.910
SRR6049663Rhizomagastrodiae_C368-T01_good_11.990
SRR6049664Rhizomagastrodiae_C368-T10_good_16.180
SRR6049665Rhizomagastrodiae_C368-T10_good_16.180
SRP279888GastroGastrodia elata tuber 50.19
JuvenJuvenile tuber4.78
Mother_GastroMother tuber of Gastrodia elata 0.63
Mother_JuvenMother tuber of Juvenile 1.43