Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|434405726\|ref\|YP_007148611.1\|	2.00E-73	ATP-dependent Clp protease proteolytic subunit ClpP [Cylindrospermum stagnale PCC 7417]
KOG	KOG0840	6.00E-139	ATP-dependent Clp protease, proteolytic subunit
nr	gi\|672126227\|ref\|XP_008786556.1\|	1.36E-154	PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic-like [Phoenix dactylifera]
Swissprot	tr\|Q9SXJ6\|CLPP3_ARATH	2.00E-139	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic (Precursor)
trEMBL	tr\|F6HSM4\|F6HSM4_VITVI	2.00E-150	ATP-dependent Clp protease proteolytic subunit {ECO:0000256\|RuleBase:RU003567}
TAIR	AT1G66670	6.00E-139	CLP protease proteolytic subunit 3

Scaffold	Start	End	Strand
GWHAAEX00000242	413539	451567	-

Transcript Sequence
>GWHTAAEX009390 ATGTTTAATAGTCTTTTAATACAGAGGTCCAAAGGATGTATTAAGCTATCAATCGAACCTGTGGGATGGCAGTAAATGGAGACTGTAGCTTATGCTTCGCTTTTCCCGTGTCCTCCTGCCAGTACCTTCTCCAAATCCTCTTCTCTCATATTTTCTCATGGCATCCATCCCGCACTACTTGGCCTCCGCCCTCTTACCGCTTCAACGGCGGCCCAACCAACGCCAACGAGAAGAGCCAGCGGCGTTGCCATGGCTATTTCAGTTCAGAGCCACAAGACATTGTCGGAACAGTGGGATCTGTCCACATCTTTGTCTGGCTCTGCTTGGATGCCGAGGTTCAGCGATCTAGATACTACAAACATGCTTCTCAGGCAGCGTATTGTGTTTCTGGGCTCTCAGGTGGATGATATGACTGCTGATTTGATAGTCAGCCAATTATTATTTTTAGATGCAGAGGATCAAAAAAAGGATATTAAACTGTTTATAAATTCACCCGGTGGTTCTATCACAGCAGGAATGGGGATATACGATGCCATGAAATTGTGCAAAGCTGATGTTTCTACTGTTTGCTTGGGTCTTGCGGCATCAATGGGTGCTTTTCTACTAGCTTCTGGAACTAAAGGAAAGAGGTTTTGTATGCCAAATGCTAGAGTTATGATACATCAACCCCTAGGAACAGCAGGAGGCAAAACAACAGAGATGGGCTTACGGATAAGAGAAATGATGTACCACAAAGTTAAGCTGAACAAAATATTGTCAAGAATAACCGGGAAACCGGAGCAGCAGATTGAAGCGGACACAGATCGAGACAATTTCATGGGCCCGTGGGAGGCAAAGGAATATGGGTTGGTTGATTCCATCATAGATGATGGAAAAGAGGGCTTGGTTGCACCAATTTCAGACGAAATCCCCCCTCCGAAAACCCGTGTGTGGGATATGTGGAAGATTGAAGGCAAGAAGGCCAAGAAAAGATTGCCTTCAGAGCTCAATCTTTCTCAATGACAACAGGCTTGAATTTGAATAAAAGCTGCAGGAATTTGAGTTGTAGTAGTAGAAGATGTTACTTTACTGATGATTTACAATGAATCAAAAGAGTAATCTGCTGGGAATAGAGTTTTTCCTTTCATACCTTTCAACCATAGGCTGCAATGATCTTCATACCTTCATTTTCAAATTGCTTCACGTAACATCTATTTATTATTGGAAGAATATAAAACCAGTGAAATAAAGCGTAGGTGTTGAATATGTATATTATA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K01358	clpP, CLPP	Cell cycle - Caulobacter	map04112
K01358	clpP, CLPP	Longevity regulating pathway - worm	map04212

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	38.780
SRP064423	SRR2545915	Juvenile tuber	54.950
SRP108465	SRR5643513	five period of Gastrodia elata	59.410
	SRR5643514	five period of Gastrodia elata	62.270
	SRR5643515	five period of Gastrodia elata	61.690
	SRR5643524	five period of Gastrodia elata	63.200
	SRR5643525	five period of Gastrodia elata	49.500
	SRR5643528	five period of Gastrodia elata	45.160
	SRR5643658	five period of Gastrodia elata	39.110
	SRR5643659	five period of Gastrodia elata	54.290
	SRR5643660	five period of Gastrodia elata	50.790
	SRR5643661	five period of Gastrodia elata	51.570
	SRR5643662	five period of Gastrodia elata	68.330
	SRR5643663	five period of Gastrodia elata	66.850
	SRR5643664	five period of Gastrodia elata	64.470
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	36.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	39.890
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	36.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	35.870
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.660
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.550
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	34.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.760
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	40.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	40.000
SRP279888	Gastro	Gastrodia elata tuber	60.69
	Juven	Juvenile tuber	66.42
	Mother_Gastro	Mother tuber of Gastrodia elata	35.79
	Mother_Juven	Mother tuber of Juvenile	41.60