Detail information of GWHGAAEX009408/evm.TU.scaffold_247.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743772831|ref|XP_010916730.1|1.96E-45PREDICTED: putative transcription factor bHLH041 [Elaeis guineensis]
Swissprottr|Q9LTS4|BH041_ARATH6.00E-27Putative transcription factor bHLH041
trEMBLtr|M0TFZ6|M0TFZ6_MUSAM2.00E-39Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P09080_001}
TAIRAT5G569602.00E-26basic helix-loop-helix (bHLH) DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000246597447600297-
Transcript Sequence

Network for GWHGAAEX009408

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH1902356.10E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.150
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata7.430
SRR5643514five period of Gastrodia elata6.130
SRR5643515five period of Gastrodia elata4.270
SRR5643524five period of Gastrodia elata8.630
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.230
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.880
SRR6049655Rhizomagastrodiae_C368-T10_good_117.130
SRR6049656Rhizomagastrodiae_C368-T07_good_17.760
SRR6049657Rhizomagastrodiae_C368-T07_good_15.330
SRR6049658Rhizomagastrodiae_C368-T04_good_111.440
SRR6049659Rhizomagastrodiae_C368-T04_good_112.210
SRR6049660Rhizomagastrodiae_C368-T01_good_16.360
SRR6049661Rhizomagastrodiae_C368-T04_good_16.370
SRR6049662Rhizomagastrodiae_C368-T01_good_111.670
SRR6049663Rhizomagastrodiae_C368-T01_good_112.310
SRR6049664Rhizomagastrodiae_C368-T10_good_119.090
SRR6049665Rhizomagastrodiae_C368-T10_good_119.090
SRP279888GastroGastrodia elata tuber 0.13
JuvenJuvenile tuber0.02
Mother_GastroMother tuber of Gastrodia elata 18.88
Mother_JuvenMother tuber of Juvenile 6.23