Detail information of GWHGAAEX009409/evm.TU.scaffold_249.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|586685556|ref|XP_006841705.1|1.05E-98hypothetical protein AMTR_s00003p00252470 [Amborella trichopoda]
Swissprottr|A2YMR0|NAC10_ORYSI4.00E-91NAC transcription factor ONAC010
trEMBLtr|W1P8R5|W1P8R5_AMBTC4.00E-99Uncharacterized protein {ECO:0000313|EMBL:ERN03380.1}
TAIRAT1G611102.00E-88NAC domain containing protein 25

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002512867929437+
Transcript Sequence

Network for GWHGAAEX009409

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM161429.00E-37
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.040
SRR2545915Juvenile tuber30.170
SRP108465SRR5643513five period of Gastrodia elata43.070
SRR5643514five period of Gastrodia elata48.090
SRR5643515five period of Gastrodia elata27.950
SRR5643524five period of Gastrodia elata33.660
SRR5643525five period of Gastrodia elata107.290
SRR5643528five period of Gastrodia elata52.500
SRR5643658five period of Gastrodia elata86.130
SRR5643659five period of Gastrodia elata59.710
SRR5643660five period of Gastrodia elata104.220
SRR5643661five period of Gastrodia elata82.630
SRR5643662five period of Gastrodia elata142.950
SRR5643663five period of Gastrodia elata175.940
SRR5643664five period of Gastrodia elata217.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_170.510
SRR6049655Rhizomagastrodiae_C368-T10_good_1126.960
SRR6049656Rhizomagastrodiae_C368-T07_good_156.840
SRR6049657Rhizomagastrodiae_C368-T07_good_154.120
SRR6049658Rhizomagastrodiae_C368-T04_good_153.520
SRR6049659Rhizomagastrodiae_C368-T04_good_152.660
SRR6049660Rhizomagastrodiae_C368-T01_good_140.260
SRR6049661Rhizomagastrodiae_C368-T04_good_140.490
SRR6049662Rhizomagastrodiae_C368-T01_good_128.160
SRR6049663Rhizomagastrodiae_C368-T01_good_139.690
SRR6049664Rhizomagastrodiae_C368-T10_good_161.240
SRR6049665Rhizomagastrodiae_C368-T10_good_161.240
SRP279888GastroGastrodia elata tuber 151.37
JuvenJuvenile tuber18.70
Mother_GastroMother tuber of Gastrodia elata 7.76
Mother_JuvenMother tuber of Juvenile 12.02