Detail information of GWHGAAEX009413/evm.TU.scaffold_249.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672161627|ref|XP_008800637.1|0PREDICTED: LOW QUALITY PROTEIN: chitin-inducible gibberellin-responsive protein 2-like [Phoenix dactylifera]
Swissprottr|Q8GVE1|CIGR2_ORYSJ0Chitin-inducible gibberellin-responsive protein 2
trEMBLtr|V7BDE6|V7BDE6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW14496.1}
TAIRAT5G481500GRAS family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000251255306269674-
Transcript Sequence

Network for GWHGAAEX009413

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS1455132.90E-133
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.810
SRR2545915Juvenile tuber39.830
SRP108465SRR5643513five period of Gastrodia elata36.620
SRR5643514five period of Gastrodia elata33.260
SRR5643515five period of Gastrodia elata33.210
SRR5643524five period of Gastrodia elata32.400
SRR5643525five period of Gastrodia elata44.550
SRR5643528five period of Gastrodia elata33.770
SRR5643658five period of Gastrodia elata41.480
SRR5643659five period of Gastrodia elata36.670
SRR5643660five period of Gastrodia elata47.970
SRR5643661five period of Gastrodia elata40.740
SRR5643662five period of Gastrodia elata59.140
SRR5643663five period of Gastrodia elata52.830
SRR5643664five period of Gastrodia elata66.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.090
SRR6049655Rhizomagastrodiae_C368-T10_good_116.000
SRR6049656Rhizomagastrodiae_C368-T07_good_121.920
SRR6049657Rhizomagastrodiae_C368-T07_good_135.850
SRR6049658Rhizomagastrodiae_C368-T04_good_116.720
SRR6049659Rhizomagastrodiae_C368-T04_good_118.750
SRR6049660Rhizomagastrodiae_C368-T01_good_122.410
SRR6049661Rhizomagastrodiae_C368-T04_good_115.950
SRR6049662Rhizomagastrodiae_C368-T01_good_116.470
SRR6049663Rhizomagastrodiae_C368-T01_good_115.100
SRR6049664Rhizomagastrodiae_C368-T10_good_124.270
SRR6049665Rhizomagastrodiae_C368-T10_good_124.270
SRP279888GastroGastrodia elata tuber 44.80
JuvenJuvenile tuber62.69
Mother_GastroMother tuber of Gastrodia elata 40.69
Mother_JuvenMother tuber of Juvenile 53.17