Detail information of GWHGAAEX009416/evm.TU.scaffold_249.10_evm.TU.scaffold_249.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672137760|ref|XP_008792612.1|9.22E-93PREDICTED: putative B3 domain-containing protein Os03g0621600 [Phoenix dactylifera]
Swissprottr|Q2QMT6|Y1208_ORYSJ6.00E-22B3 domain-containing protein LOC_Os12g40080
trEMBLtr|A0A061DG19|A0A061DG19_THECC5.00E-33Uncharacterized protein {ECO:0000313|EMBL:EOX91274.1}
TAIRAT5G669807.00E-14AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000251334435363801+
Transcript Sequence

Network for GWHGAAEX009416

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.20B311931.40E-10
PF02362.20B31832674.80E-16
PF02362.20B33113902.20E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.930
SRR2545915Juvenile tuber10.080
SRP108465SRR5643513five period of Gastrodia elata9.700
SRR5643514five period of Gastrodia elata13.170
SRR5643515five period of Gastrodia elata10.050
SRR5643524five period of Gastrodia elata11.370
SRR5643525five period of Gastrodia elata27.810
SRR5643528five period of Gastrodia elata20.790
SRR5643658five period of Gastrodia elata26.050
SRR5643659five period of Gastrodia elata8.930
SRR5643660five period of Gastrodia elata8.220
SRR5643661five period of Gastrodia elata6.940
SRR5643662five period of Gastrodia elata7.940
SRR5643663five period of Gastrodia elata9.630
SRR5643664five period of Gastrodia elata8.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.920
SRR6049655Rhizomagastrodiae_C368-T10_good_110.320
SRR6049656Rhizomagastrodiae_C368-T07_good_115.850
SRR6049657Rhizomagastrodiae_C368-T07_good_120.920
SRR6049658Rhizomagastrodiae_C368-T04_good_118.680
SRR6049659Rhizomagastrodiae_C368-T04_good_119.550
SRR6049660Rhizomagastrodiae_C368-T01_good_119.050
SRR6049661Rhizomagastrodiae_C368-T04_good_115.410
SRR6049662Rhizomagastrodiae_C368-T01_good_114.980
SRR6049663Rhizomagastrodiae_C368-T01_good_117.110
SRR6049664Rhizomagastrodiae_C368-T10_good_113.640
SRR6049665Rhizomagastrodiae_C368-T10_good_113.640
SRP279888GastroGastrodia elata tuber 8.42
JuvenJuvenile tuber8.94
Mother_GastroMother tuber of Gastrodia elata 12.83
Mother_JuvenMother tuber of Juvenile 10.80