Detail information of GWHGAAEX009434/evm.TU.scaffold_25.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434404428|ref|YP_007147313.1|7.00E-16putative NTP pyrophosphohydrolase [Cylindrospermum stagnale PCC 7417]
KOGKOG28394.00E-66Diadenosine and diphosphoinositol polyphosphate phosphohydrolase
nrgi|695032503|ref|XP_009403801.1|6.89E-82PREDICTED: nudix hydrolase 12, mitochondrial-like isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q52K88|NUD13_ARATH1.00E-66Nudix hydrolase 13, mitochondrial (Precursor)
trEMBLtr|M0T569|M0T569_MUSAM3.00E-82Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P08200_001}
TAIRAT3G266904.00E-66nudix hydrolase homolog 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000030187240190110+
Transcript Sequence

Network for GWHGAAEX009434

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00293.27NUDIX481609.30E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.070
SRR2545915Juvenile tuber26.380
SRP108465SRR5643513five period of Gastrodia elata20.910
SRR5643514five period of Gastrodia elata10.180
SRR5643515five period of Gastrodia elata12.080
SRR5643524five period of Gastrodia elata13.920
SRR5643525five period of Gastrodia elata29.430
SRR5643528five period of Gastrodia elata15.870
SRR5643658five period of Gastrodia elata25.900
SRR5643659five period of Gastrodia elata16.050
SRR5643660five period of Gastrodia elata8.230
SRR5643661five period of Gastrodia elata11.190
SRR5643662five period of Gastrodia elata7.370
SRR5643663five period of Gastrodia elata6.780
SRR5643664five period of Gastrodia elata8.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.330
SRR6049655Rhizomagastrodiae_C368-T10_good_19.660
SRR6049656Rhizomagastrodiae_C368-T07_good_125.000
SRR6049657Rhizomagastrodiae_C368-T07_good_133.370
SRR6049658Rhizomagastrodiae_C368-T04_good_139.250
SRR6049659Rhizomagastrodiae_C368-T04_good_140.810
SRR6049660Rhizomagastrodiae_C368-T01_good_125.070
SRR6049661Rhizomagastrodiae_C368-T04_good_139.330
SRR6049662Rhizomagastrodiae_C368-T01_good_18.570
SRR6049663Rhizomagastrodiae_C368-T01_good_112.590
SRR6049664Rhizomagastrodiae_C368-T10_good_116.150
SRR6049665Rhizomagastrodiae_C368-T10_good_116.150
SRP279888GastroGastrodia elata tuber 18.38
JuvenJuvenile tuber7.82
Mother_GastroMother tuber of Gastrodia elata 10.83
Mother_JuvenMother tuber of Juvenile 8.03