Detail information of GWHGAAEX009435/evm.TU.scaffold_25.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31861.00E-82Mitotic spindle checkpoint protein
nrgi|695063657|ref|XP_009420342.1|1.33E-106PREDICTED: DNA polymerase zeta processivity subunit [Musa acuminata subsp. malaccensis]
Swissprottr|Q94FL5|REV7_ARATH1.00E-83DNA polymerase zeta processivity subunit
trEMBLtr|M0RFR1|M0RFR1_MUSAM5.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P05840_001}
TAIRAT1G165901.00E-82DNA-binding HORMA family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000030216774237572-
Transcript Sequence

Network for GWHGAAEX009435

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02301.17HORMA151112.70E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13728MAD2L2 Cell cycle map04110
Oocyte meiosismap04114
Progesterone-mediated oocyte maturationmap04914

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.340
SRR2545915Juvenile tuber15.030
SRP108465SRR5643513five period of Gastrodia elata29.750
SRR5643514five period of Gastrodia elata29.880
SRR5643515five period of Gastrodia elata31.390
SRR5643524five period of Gastrodia elata34.680
SRR5643525five period of Gastrodia elata45.000
SRR5643528five period of Gastrodia elata37.360
SRR5643658five period of Gastrodia elata48.560
SRR5643659five period of Gastrodia elata29.260
SRR5643660five period of Gastrodia elata30.740
SRR5643661five period of Gastrodia elata29.820
SRR5643662five period of Gastrodia elata30.960
SRR5643663five period of Gastrodia elata28.090
SRR5643664five period of Gastrodia elata28.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.040
SRR6049655Rhizomagastrodiae_C368-T10_good_17.160
SRR6049656Rhizomagastrodiae_C368-T07_good_120.540
SRR6049657Rhizomagastrodiae_C368-T07_good_123.510
SRR6049658Rhizomagastrodiae_C368-T04_good_117.880
SRR6049659Rhizomagastrodiae_C368-T04_good_117.020
SRR6049660Rhizomagastrodiae_C368-T01_good_120.050
SRR6049661Rhizomagastrodiae_C368-T04_good_118.330
SRR6049662Rhizomagastrodiae_C368-T01_good_119.930
SRR6049663Rhizomagastrodiae_C368-T01_good_116.790
SRR6049664Rhizomagastrodiae_C368-T10_good_123.670
SRR6049665Rhizomagastrodiae_C368-T10_good_123.670
SRP279888GastroGastrodia elata tuber 34.58
JuvenJuvenile tuber46.78
Mother_GastroMother tuber of Gastrodia elata 33.19
Mother_JuvenMother tuber of Juvenile 36.45