Gene detail

Detail information of GWHGAAEX009438/evm.TU.scaffold_25.13

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|590648094\|ref\|XP_007032080.1\|	3.16E-36	Uncharacterized protein TCM_017399 [Theobroma cacao]
trEMBL	tr\|A0A061EDJ6\|A0A061EDJ6_THECC	1.00E-36	Uncharacterized protein {ECO:0000313\|EMBL:EOY03006.1}
TAIR	AT1G52140	8.00E-08	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000030	380222	381678	-

Transcript Sequence
>GWHTAAEX009438 AACAACACCTTCCACCAACCGTTCCCTCCTCCATAAATAATCCTCGACCCTTACCTCCCCTCTCCTCCCATCGAGGGTTCTCTTCTCTGCAAGAGAAACCCCCTTTCTCCCTCTCTCTTATACCGTCCATGGTTGCCTCAGGCAAGCGCCTCCTAAGCCACCTTCGTGTGGCCTTCTTCATGCTGAGAAAAGGCCTCGTCTCGAAGAGAAAGCTGTTAATGGACACCAACCTCATGATGAAGCACGGCAAGCTCATGCGAAAGGCACTCAGCAGCCTCCACGTGTTCGGCCACCACCGCACCAAAGGTTGCGGCCTGCAGGAATACGAGTTCTCCTGCAGCGACAGCCCTAGCCCTGTTTTTTTCAACGGCTACTTCCCCTGCCTCGGAGTTCCTGTGGCCGTTGATGTGGCGGCCATGCCGAGGTTTCAGTTCTCCTCTTCGGAGGAGAGCGGGGAGGAGATGTCGGAATGCAGCAGTCAAGTGGATGACATGGCGGAGGAGTTCATTAGGAGGTTTTATGAACAGCTGAGGAGACAGCCGCTTTGCCTTCCTGCTCTGTGATCTGTGCTTGGTTAAATCTGCGCTGTTTATTTGTATTTTCTTCTACAATATGCCTTTTGCTGATGCTTGTGGGATTGGGATTTGCTGAAATTGAATTGGGTTGTGATTTTTTTCGTTTGAGCCCAATATTTGTAGGTTTTTTATTTATTCATTATTTTCTTGACAATGTGAAATTTCCAACACTCGGCCAACATGGATTGATTGCATGAGCTAGCCAATAAAGAGAAAGTTTGCAACTTACAAGGAGTGTGCCACCCTTCTCTTTAGCAGCTGCCGCAATAGAAGAACCAAGTGACAGAATGTGAGCCATGATCAATGAATCAAGAGGAAATGCTATTAATTCTCTTTATCACAGCGGTCTATATGTGTAAAGACCTGAACCAATTAAGCATTAGGGGCCAGTTGGAGAATTTAAGTAGTTGGAGCCTCTCAGGTAGAGATTAGAACATGCAAGGCCATCCATACATTGACTTACAAATTTTAACCCTCAAAGAAAGGGGAGCGATGATTGTCCTTGGTGTTGAGAAGAGATACAACCAATCCCATATATATAGTAGGCAAAGAGTCAGTTTTGAAGCACAATATACCAGCTAGTTCATTCGAATTCGCAACATTATTAGAGAAAAGTGGCAATTTTTTTCATATTTTAGAAGAGACTTGAAGCTTGAGAGAATTTATCAGAGAAATCCTGAAAAACATGTTGGTAGCTTTACCTAAGATGAGCACATCAACCGCAAAGAGGAGATGGGAGCATGATGAGAAGCTTGTCTCCATTCAATATAGCCGACTTGTGCGAGGTTTATATGGTTTCAAAGAAGAAGGGCCAACCTTGCAGTTAGAATTTTAGCTATAGTCTTATATATTGTGTTACGTAGGGAAATAGGTCTGATGTCA

Network for GWHGAAEX009438

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05553.10	DUF761	118	137	1.40E-07

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.350
SRP064423	SRR2545915	Juvenile tuber	4.490
SRP108465	SRR5643513	five period of Gastrodia elata	2.500
	SRR5643514	five period of Gastrodia elata	2.030
	SRR5643515	five period of Gastrodia elata	4.600
	SRR5643524	five period of Gastrodia elata	1.600
	SRR5643525	five period of Gastrodia elata	65.340
	SRR5643528	five period of Gastrodia elata	131.150
	SRR5643658	five period of Gastrodia elata	418.800
	SRR5643659	five period of Gastrodia elata	1.300
	SRR5643660	five period of Gastrodia elata	1.410
	SRR5643661	five period of Gastrodia elata	1.030
	SRR5643662	five period of Gastrodia elata	5.000
	SRR5643663	five period of Gastrodia elata	2.550
	SRR5643664	five period of Gastrodia elata	3.610
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.370
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.770
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.080
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.280
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.380
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.380
SRP279888	Gastro	Gastrodia elata tuber	4.27
	Juven	Juvenile tuber	0.34
	Mother_Gastro	Mother tuber of Gastrodia elata	4.51
	Mother_Juven	Mother tuber of Juvenile	1.13