Detail information of GWHGAAEX009444/evm.TU.scaffold_25.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|312128919|ref|YP_003996259.1|2.00E-22short-chain dehydrogenase/reductase sdr [Leadbetterella byssophila DSM 17132]
nrgi|721659862|ref|XP_003571945.2|1.45E-108PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Brachypodium distachyon]
Swissprottr|Q8L9C4|KCR1_ARATH1.00E-92Very-long-chain 3-oxoacyl-CoA reductase 1
trEMBLtr|I1I556|I1I556_BRADI6.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G30120.1}
TAIRAT1G67730_21.00E-90Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000030585476639840-
Transcript Sequence

Network for GWHGAAEX009444

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00106.24adh_short452333.40E-36
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10251HSD17B12, KAR, IFA38 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Steroid hormone biosynthesismap00140
Biosynthesis of unsaturated fatty acidsmap01040

Gene Ontology

GO term OntologyName
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.380
SRR2545915Juvenile tuber1.040
SRP108465SRR5643513five period of Gastrodia elata0.790
SRR5643514five period of Gastrodia elata1.260
SRR5643515five period of Gastrodia elata1.050
SRR5643524five period of Gastrodia elata2.890
SRR5643525five period of Gastrodia elata0.550
SRR5643528five period of Gastrodia elata0.060
SRR5643658five period of Gastrodia elata0.340
SRR5643659five period of Gastrodia elata0.230
SRR5643660five period of Gastrodia elata0.050
SRR5643661five period of Gastrodia elata0.200
SRR5643662five period of Gastrodia elata0.100
SRR5643663five period of Gastrodia elata0.080
SRR5643664five period of Gastrodia elata0.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.750
SRR6049655Rhizomagastrodiae_C368-T10_good_12.630
SRR6049656Rhizomagastrodiae_C368-T07_good_11.250
SRR6049657Rhizomagastrodiae_C368-T07_good_12.020
SRR6049658Rhizomagastrodiae_C368-T04_good_11.180
SRR6049659Rhizomagastrodiae_C368-T04_good_10.730
SRR6049660Rhizomagastrodiae_C368-T01_good_10.700
SRR6049661Rhizomagastrodiae_C368-T04_good_11.220
SRR6049662Rhizomagastrodiae_C368-T01_good_10.420
SRR6049663Rhizomagastrodiae_C368-T01_good_10.220
SRR6049664Rhizomagastrodiae_C368-T10_good_13.420
SRR6049665Rhizomagastrodiae_C368-T10_good_13.420
SRP279888GastroGastrodia elata tuber 0.77
JuvenJuvenile tuber0.31
Mother_GastroMother tuber of Gastrodia elata 0.26
Mother_JuvenMother tuber of Juvenile 0.08