Detail information of GWHGAAEX009449/evm.TU.scaffold_25.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|731387823|ref|XP_002275141.2|4.04E-52PREDICTED: transcription factor HEC3 [Vitis vinifera]
Swissprottr|O81313|IND_ARATH3.00E-43Transcription factor IND
trEMBLtr|F6I0G0|F6I0G0_VITVI2.00E-52Putative uncharacterized protein {ECO:0000313|EMBL:CCB60426.1}
TAIRAT4G001201.00E-42basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000030858237859115+
Transcript Sequence

Network for GWHGAAEX009449

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH881282.90E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.200
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata3.200
SRR5643514five period of Gastrodia elata0.400
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.260
SRR5643525five period of Gastrodia elata0.110
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.090
SRR5643660five period of Gastrodia elata0.090
SRR5643661five period of Gastrodia elata0.190
SRR5643662five period of Gastrodia elata0.190
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.390
SRR6049655Rhizomagastrodiae_C368-T10_good_11.220
SRR6049656Rhizomagastrodiae_C368-T07_good_10.880
SRR6049657Rhizomagastrodiae_C368-T07_good_10.730
SRR6049658Rhizomagastrodiae_C368-T04_good_10.840
SRR6049659Rhizomagastrodiae_C368-T04_good_10.220
SRR6049660Rhizomagastrodiae_C368-T01_good_11.620
SRR6049661Rhizomagastrodiae_C368-T04_good_12.800
SRR6049662Rhizomagastrodiae_C368-T01_good_10.670
SRR6049663Rhizomagastrodiae_C368-T01_good_10.660
SRR6049664Rhizomagastrodiae_C368-T10_good_11.580
SRR6049665Rhizomagastrodiae_C368-T10_good_11.580
SRP279888GastroGastrodia elata tuber 0.06
JuvenJuvenile tuber0.72
Mother_GastroMother tuber of Gastrodia elata 0.87
Mother_JuvenMother tuber of Juvenile 0.58