Detail information of GWHGAAEX009456/evm.TU.scaffold_25.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG05205.00E-61Uncharacterized conserved protein, contains IPT/TIG domain
nrgi|672125626|ref|XP_008786234.1|6.89E-96PREDICTED: calmodulin-binding transcription activator 5-like isoform X1 [Phoenix dactylifera]
Swissprottr|O23463|CMTA5_ARATH7.00E-57Calmodulin-binding transcription activator 5
trEMBLtr|I1GUA4|I1GUA4_BRADI3.00E-69Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G27170.1}
TAIRAT3G169405.00E-61calmodulin binding;transcription regulators

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003012601161310340-
Transcript Sequence

Network for GWHGAAEX009456

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03859.15CG-1311431.20E-45
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.060
SRR2545915Juvenile tuber20.650
SRP108465SRR5643513five period of Gastrodia elata11.090
SRR5643514five period of Gastrodia elata10.990
SRR5643515five period of Gastrodia elata9.890
SRR5643524five period of Gastrodia elata9.800
SRR5643525five period of Gastrodia elata8.200
SRR5643528five period of Gastrodia elata7.530
SRR5643658five period of Gastrodia elata9.270
SRR5643659five period of Gastrodia elata14.010
SRR5643660five period of Gastrodia elata10.610
SRR5643661five period of Gastrodia elata9.060
SRR5643662five period of Gastrodia elata8.870
SRR5643663five period of Gastrodia elata9.800
SRR5643664five period of Gastrodia elata13.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.340
SRR6049655Rhizomagastrodiae_C368-T10_good_16.820
SRR6049656Rhizomagastrodiae_C368-T07_good_110.050
SRR6049657Rhizomagastrodiae_C368-T07_good_114.770
SRR6049658Rhizomagastrodiae_C368-T04_good_111.000
SRR6049659Rhizomagastrodiae_C368-T04_good_113.560
SRR6049660Rhizomagastrodiae_C368-T01_good_110.700
SRR6049661Rhizomagastrodiae_C368-T04_good_110.700
SRR6049662Rhizomagastrodiae_C368-T01_good_19.370
SRR6049663Rhizomagastrodiae_C368-T01_good_111.860
SRR6049664Rhizomagastrodiae_C368-T10_good_110.080
SRR6049665Rhizomagastrodiae_C368-T10_good_110.080
SRP279888GastroGastrodia elata tuber 11.24
JuvenJuvenile tuber12.48
Mother_GastroMother tuber of Gastrodia elata 6.55
Mother_JuvenMother tuber of Juvenile 9.34