Detail information of GWHGAAEX009467/evm.TU.scaffold_25.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24590GPI transamidase complex, GPI17/PIG-S component, involved in glycosylphosphatidylinositol anchor biosynthesis
nrgi|672110756|ref|XP_008797152.1|0PREDICTED: LOW QUALITY PROTEIN: GPI transamidase component PIG-S [Phoenix dactylifera]
trEMBLtr|M0RQK6|M0RQK6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P08760_001}
TAIRAT3G071800GPI transamidase component PIG-S-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003015710741643298+
Transcript Sequence

Network for GWHGAAEX009467

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10510.8PIG-S405911.90E-118
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05291PIGS Metabolic pathways map01100
Glycosylphosphatidylinositol (GPI)-anchor biosynthesismap00563

Gene Ontology

GO term OntologyName
GO:0016255Biological Processattachment of GPI anchor to protein
GO:0042765Cellular ComponentGPI-anchor transamidase complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.950
SRR2545915Juvenile tuber14.830
SRP108465SRR5643513five period of Gastrodia elata22.290
SRR5643514five period of Gastrodia elata27.180
SRR5643515five period of Gastrodia elata23.770
SRR5643524five period of Gastrodia elata25.910
SRR5643525five period of Gastrodia elata16.370
SRR5643528five period of Gastrodia elata14.270
SRR5643658five period of Gastrodia elata16.000
SRR5643659five period of Gastrodia elata13.260
SRR5643660five period of Gastrodia elata15.560
SRR5643661five period of Gastrodia elata15.630
SRR5643662five period of Gastrodia elata13.290
SRR5643663five period of Gastrodia elata14.480
SRR5643664five period of Gastrodia elata13.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.980
SRR6049655Rhizomagastrodiae_C368-T10_good_124.730
SRR6049656Rhizomagastrodiae_C368-T07_good_116.650
SRR6049657Rhizomagastrodiae_C368-T07_good_115.710
SRR6049658Rhizomagastrodiae_C368-T04_good_114.010
SRR6049659Rhizomagastrodiae_C368-T04_good_19.980
SRR6049660Rhizomagastrodiae_C368-T01_good_115.160
SRR6049661Rhizomagastrodiae_C368-T04_good_114.990
SRR6049662Rhizomagastrodiae_C368-T01_good_121.230
SRR6049663Rhizomagastrodiae_C368-T01_good_116.800
SRR6049664Rhizomagastrodiae_C368-T10_good_122.620
SRR6049665Rhizomagastrodiae_C368-T10_good_122.620
SRP279888GastroGastrodia elata tuber 10.24
JuvenJuvenile tuber15.82
Mother_GastroMother tuber of Gastrodia elata 10.28
Mother_JuvenMother tuber of Juvenile 12.61