Detail information of GWHGAAEX009473/evm.TU.scaffold_25.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|298205236|emb|CBI17295.3|7.42E-67unnamed protein product [Vitis vinifera]
Swissprottr|Q9SRT2|BH062_ARATH4.00E-51Transcription factor bHLH62
trEMBLtr|M0TAS3|M0TAS3_MUSAM1.00E-64Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P27780_001}
TAIRAT3G073401.00E-50basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003019409851943053-
Transcript Sequence

Network for GWHGAAEX009473

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH1652122.20E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.080
SRR2545915Juvenile tuber21.990
SRP108465SRR5643513five period of Gastrodia elata12.060
SRR5643514five period of Gastrodia elata11.770
SRR5643515five period of Gastrodia elata9.270
SRR5643524five period of Gastrodia elata12.070
SRR5643525five period of Gastrodia elata9.250
SRR5643528five period of Gastrodia elata9.160
SRR5643658five period of Gastrodia elata13.670
SRR5643659five period of Gastrodia elata12.040
SRR5643660five period of Gastrodia elata7.260
SRR5643661five period of Gastrodia elata8.380
SRR5643662five period of Gastrodia elata6.870
SRR5643663five period of Gastrodia elata8.740
SRR5643664five period of Gastrodia elata5.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.670
SRR6049655Rhizomagastrodiae_C368-T10_good_16.140
SRR6049656Rhizomagastrodiae_C368-T07_good_110.880
SRR6049657Rhizomagastrodiae_C368-T07_good_19.910
SRR6049658Rhizomagastrodiae_C368-T04_good_18.790
SRR6049659Rhizomagastrodiae_C368-T04_good_15.160
SRR6049660Rhizomagastrodiae_C368-T01_good_17.100
SRR6049661Rhizomagastrodiae_C368-T04_good_111.320
SRR6049662Rhizomagastrodiae_C368-T01_good_112.220
SRR6049663Rhizomagastrodiae_C368-T01_good_18.510
SRR6049664Rhizomagastrodiae_C368-T10_good_113.320
SRR6049665Rhizomagastrodiae_C368-T10_good_113.320
SRP279888GastroGastrodia elata tuber 7.82
JuvenJuvenile tuber4.26
Mother_GastroMother tuber of Gastrodia elata 3.19
Mother_JuvenMother tuber of Juvenile 2.97